Detailed information
Bioinformatically predicted
Overview
| Name | rcrQ | Type | Regulator |
| Locus tag | RSTT_RS01945 | Genome accession | NZ_AP017459 |
| Coordinates | 397690..398124 (+) | Length | 144 a.a. |
| NCBI ID | WP_149030008.1 | Uniprot ID | - |
| Organism | Candidatus Endomicrobiellum trichonymphae isolate Rs-D17 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 392690..403124
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RSTT_RS01920 (RSTT_244) | - | 392788..393984 (+) | 1197 | WP_096525473.1 | FprA family A-type flavoprotein | - |
| RSTT_RS01925 (RSTT_245) | - | 394122..394565 (+) | 444 | WP_015423281.1 | desulfoferrodoxin family protein | - |
| RSTT_RS01930 (RSTT_246) | rbr | 394765..395343 (+) | 579 | WP_096525474.1 | rubrerythrin | - |
| RSTT_RS01935 (RSTT_247) | - | 395639..396406 (-) | 768 | WP_096525475.1 | RNA methyltransferase | - |
| RSTT_RS01940 | - | 396632..396844 (+) | 213 | WP_149030007.1 | hypothetical protein | - |
| RSTT_RS06920 | - | 397482..397586 (+) | 105 | Protein_375 | ATP-binding cassette domain-containing protein | - |
| RSTT_RS01945 | rcrQ | 397690..398124 (+) | 435 | WP_149030008.1 | ATP-binding cassette domain-containing protein | Regulator |
| RSTT_RS01965 (RSTT_248) | - | 399281..400021 (+) | 741 | WP_149030009.1 | hypothetical protein | - |
| RSTT_RS06755 | - | 400794..400925 (+) | 132 | WP_269457766.1 | hypothetical protein | - |
| RSTT_RS01970 | - | 401093..401296 (+) | 204 | WP_095558714.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 15960.20 Da Isoelectric Point: 7.3988
>NTDB_id=67950 RSTT_RS01945 WP_149030008.1 397690..398124(+) (rcrQ) [Candidatus Endomicrobiellum trichonymphae isolate Rs-D17]
MGRPAATDEEVIEASKNAAAHNFIVNQERKYDTIVGERGGNLSGGQKQMISIARAMLKNAPILLLDEATSSLDSQSEKIV
QEGLDKLIKGRTSIVIAHRLSTIINSDRIYVFESGNIVESGTHKELLKLKGYYTNLYKLQFVHE
MGRPAATDEEVIEASKNAAAHNFIVNQERKYDTIVGERGGNLSGGQKQMISIARAMLKNAPILLLDEATSSLDSQSEKIV
QEGLDKLIKGRTSIVIAHRLSTIINSDRIYVFESGNIVESGTHKELLKLKGYYTNLYKLQFVHE
Nucleotide
Download Length: 435 bp
>NTDB_id=67950 RSTT_RS01945 WP_149030008.1 397690..398124(+) (rcrQ) [Candidatus Endomicrobiellum trichonymphae isolate Rs-D17]
ATGGGCAGACCGGCCGCAACGGATGAAGAAGTCATAGAAGCATCGAAGAATGCTGCAGCACATAACTTTATAGTAAATCA
GGAACGCAAATATGATACTATTGTCGGTGAAAGAGGCGGTAATTTGTCCGGCGGACAAAAACAAATGATATCTATTGCGA
GAGCCATGTTAAAAAATGCTCCAATACTTTTGCTTGACGAAGCTACAAGCTCGCTGGATTCCCAATCTGAAAAAATAGTT
CAGGAAGGACTTGATAAACTTATAAAAGGCAGAACTTCAATAGTTATAGCGCACCGCTTATCTACAATAATCAATTCTGA
CAGAATATACGTGTTTGAATCCGGCAATATAGTAGAATCGGGAACACACAAAGAACTTCTGAAATTAAAAGGTTATTATA
CAAATCTTTACAAACTCCAATTTGTTCATGAATGA
ATGGGCAGACCGGCCGCAACGGATGAAGAAGTCATAGAAGCATCGAAGAATGCTGCAGCACATAACTTTATAGTAAATCA
GGAACGCAAATATGATACTATTGTCGGTGAAAGAGGCGGTAATTTGTCCGGCGGACAAAAACAAATGATATCTATTGCGA
GAGCCATGTTAAAAAATGCTCCAATACTTTTGCTTGACGAAGCTACAAGCTCGCTGGATTCCCAATCTGAAAAAATAGTT
CAGGAAGGACTTGATAAACTTATAAAAGGCAGAACTTCAATAGTTATAGCGCACCGCTTATCTACAATAATCAATTCTGA
CAGAATATACGTGTTTGAATCCGGCAATATAGTAGAATCGGGAACACACAAAGAACTTCTGAAATTAAAAGGTTATTATA
CAAATCTTTACAAACTCCAATTTGTTCATGAATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrQ | Streptococcus mutans UA159 |
51.449 |
95.833 |
0.493 |
| comA/nlmT | Streptococcus mutans UA159 |
42.647 |
94.444 |
0.403 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
41.481 |
93.75 |
0.389 |
| comA | Streptococcus mitis SK321 |
40 |
93.75 |
0.375 |
| comA | Streptococcus pneumoniae Rx1 |
39.259 |
93.75 |
0.368 |
| comA | Streptococcus pneumoniae D39 |
39.259 |
93.75 |
0.368 |
| comA | Streptococcus pneumoniae R6 |
39.259 |
93.75 |
0.368 |
| comA | Streptococcus pneumoniae TIGR4 |
39.259 |
93.75 |
0.368 |
| comA | Streptococcus mitis NCTC 12261 |
39.259 |
93.75 |
0.368 |