Detailed information NTG0679495

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG627_RS23725
• Genome accession: NZ_CP109599
• Coordinates: 5398922..5400214 (+)
• Length: 430 a.a.
• NCBI ID: WP_329068252.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01429
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5393922..5405214

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG627_RS23695 (OG627_23705)	-	5394946..5395140 (+)	195	WP_329068246.1	hypothetical protein	-
OG627_RS23710 (OG627_23720)	tig	5395690..5397126 (+)	1437	WP_329068248.1	trigger factor	-
OG627_RS23715 (OG627_23725)	clpP	5397414..5398019 (+)	606	WP_329072915.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG627_RS23720 (OG627_23730)	clpP	5398077..5398754 (+)	678	WP_329068250.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG627_RS23725 (OG627_23735)	clpX	5398922..5400214 (+)	1293	WP_329068252.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG627_RS23730 (OG627_23740)	-	5400294..5401283 (-)	990	WP_329068254.1	hypothetical protein	-
OG627_RS23735 (OG627_23745)	-	5401421..5404042 (+)	2622	WP_329068256.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47139.96 Da
• Isoelectric Point: 4.7951

>NTDB_id=679495 OG627_RS23725 WP_329068252.1 5398922..5400214(+) (clpX) [Streptomyces sp. NBC_01429]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGAGREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKREVEESDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFEIDGVELEFDRPALEAIADQAILRGTGARGLRAILEEVLQSVMYEVPSRKDVARVVIT
AEVVRDNVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=679495 OG627_RS23725 WP_329068252.1 5398922..5400214(+) (clpX) [Streptomyces sp. NBC_01429]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGTCCCGGTGTCTACATCTGCGACGAGTGCATCGATCTCTGCAATGAGATCATCGAGGAAGAACTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTTCCCAAGCCGCGCGAGATCTACGAGTTCCTGGAGGGATACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTGGCTGTCTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGTGGCGCGGGTCG
CGAGGACGCGATCGAGCTGGCCAAGTCCAACATTCTGCTGCTCGGCCCCACCGGCTCGGGCAAGACGCTCCTCGCGCAGA
CACTGGCGCGCATGCTGAACGTACCGTTCGCCATCGCCGACGCGACGGCGCTCACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCGC
TGCTGAAGATCCTGGAAGGCACCACGGCCTCGGTCCCCCCGCAGGGCGGCCGGAAACACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCCGGTCTGGAGAAGATCATCGAGTCCCGCGCGGGCGC
GAAGGGCATCGGCTTCGGTGCCACGATCCGCTCCAAGCGCGAGGTCGAGGAGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGGCTGCCCGTCCTCACCTCGGTCCACAACCTCGACCGC
GAGGCGCTGCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGCCTCTTCGAAATCGACGGTGT
GGAGCTGGAGTTCGACCGTCCGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGGGCGCGCGGGCTGC
GCGCCATCCTCGAAGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGAGGTCGTCCGCGACAACGTGAACCCGACGCTGGTGCCGCGCGAGCCGCGCATCGTGAAGAACGACGGCCGCCACGA
GAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-396)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.488	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.883	95.814	0.516