Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilX   Type   Machinery gene
Locus tag   MZN68_RS02620 Genome accession   NZ_CP096117
Coordinates   520691..521164 (+) Length   157 a.a.
NCBI ID   WP_002247808.1    Uniprot ID   -
Organism   Neisseria meningitidis strain DFS-1910310016     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 515691..526164
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MZN68_RS02595 (MZN68_02585) dnaB 516137..517543 (+) 1407 WP_002213843.1 replicative DNA helicase -
  MZN68_RS02600 (MZN68_02590) pilH 517852..518529 (+) 678 WP_061701871.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  MZN68_RS02605 (MZN68_02595) pilV 518553..519173 (+) 621 WP_061725124.1 type IV pilus modification protein PilV Machinery gene
  MZN68_RS02610 (MZN68_02600) pilJ 519170..520108 (+) 939 WP_076612512.1 PilW family protein Machinery gene
  MZN68_RS02615 (MZN68_02605) pilK 520087..520686 (+) 600 WP_076612511.1 PilX N-terminal domain-containing pilus assembly protein Machinery gene
  MZN68_RS02620 (MZN68_02610) pilX 520691..521164 (+) 474 WP_002247808.1 PilX family type IV pilin Machinery gene
  MZN68_RS02625 (MZN68_02615) - 522912..523340 (-) 429 Protein_511 AzlC family ABC transporter permease -
  MZN68_RS02630 (MZN68_02620) dut 523483..523935 (+) 453 WP_002220679.1 dUTP diphosphatase -
  MZN68_RS02635 (MZN68_02625) dapC 524011..525198 (+) 1188 WP_076612509.1 succinyldiaminopimelate transaminase -
  MZN68_RS02640 - 525286..525411 (+) 126 Protein_514 IS5/IS1182 family transposase -

Sequence

Protein


Download         Length: 157 a.a.        Molecular weight: 17402.18 Da        Isoelectric Point: 9.7122

>NTDB_id=679498 MZN68_RS02620 WP_002247808.1 520691..521164(+) (pilX) [Neisseria meningitidis strain DFS-1910310016]
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNTVKQLILKNPLDDNQTIKSKLEIFVSGYKM
NPKIAKKYSVSVRFVDKEKSRAYSLVGVPKAGTGYTLSVWMNSVGDGYKCRDAASARAYSETLSADAGCEAFSNRKK

Nucleotide


Download         Length: 474 bp        

>NTDB_id=679498 MZN68_RS02620 WP_002247808.1 520691..521164(+) (pilX) [Neisseria meningitidis strain DFS-1910310016]
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTCGTCGCGATACTCGGCATCATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATACTGTCAAAC
AGCTTATTTTGAAAAATCCCCTGGACGATAATCAGACCATCAAGAGCAAACTGGAAATATTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCAAAAAATATAGTGTTTCGGTAAGGTTTGTCGATAAGGAAAAATCAAGGGCATACAGCTTGGTCGG
CGTTCCGAAGGCGGGGACGGGTTATACTTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTGATGCCG
CTTCTGCCCGAGCCTATTCGGAGACTTTATCCGCAGATGCCGGCTGCGAAGCTTTCTCTAATCGTAAAAAATAG

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(3-25)

Minor type IV pilin, PilX (Pilin_PilX)

(31-157)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilX Neisseria meningitidis 8013

91.083

100

0.911
  pilL Neisseria gonorrhoeae MS11

89.172

100

0.892