Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | O77CONTIG1_RS03270 | Genome accession | NZ_AP017367 |
| Coordinates | 759504..759869 (+) | Length | 121 a.a. |
| NCBI ID | WP_068508027.1 | Uniprot ID | A0A6M8BD67 |
| Organism | Leptolyngbya sp. O-77 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 754504..764869
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O77CONTIG1_RS03260 (O77CONTIG1_00688) | hmpF | 754909..756669 (-) | 1761 | WP_068508023.1 | pilus motility taxis protein HmpF | - |
| O77CONTIG1_RS03265 (O77CONTIG1_00689) | - | 757955..759256 (+) | 1302 | WP_317134200.1 | response regulator | - |
| O77CONTIG1_RS03270 (O77CONTIG1_00690) | pilH | 759504..759869 (+) | 366 | WP_068508027.1 | response regulator transcription factor | Machinery gene |
| O77CONTIG1_RS03275 (O77CONTIG1_00691) | - | 760007..760435 (+) | 429 | WP_317134201.1 | chemotaxis protein CheW | - |
| O77CONTIG1_RS03280 (O77CONTIG1_00692) | - | 760524..763403 (+) | 2880 | WP_068508032.1 | methyl-accepting chemotaxis protein | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13368.41 Da Isoelectric Point: 4.6926
>NTDB_id=67752 O77CONTIG1_RS03270 WP_068508027.1 759504..759869(+) (pilH) [Leptolyngbya sp. O-77]
MSRVLVVEDSVTQREMITDLLKGSGLDVTVASDGVEALEQIEGHSPDLVVLDIVMPRMNGYEVCRQIKANPKTQNIPVVM
CSSKGEEFDRYWGMKQGADAYIAKPFQPTELVGTVKQLLRG
MSRVLVVEDSVTQREMITDLLKGSGLDVTVASDGVEALEQIEGHSPDLVVLDIVMPRMNGYEVCRQIKANPKTQNIPVVM
CSSKGEEFDRYWGMKQGADAYIAKPFQPTELVGTVKQLLRG
Nucleotide
Download Length: 366 bp
>NTDB_id=67752 O77CONTIG1_RS03270 WP_068508027.1 759504..759869(+) (pilH) [Leptolyngbya sp. O-77]
ATGAGTAGAGTTTTGGTTGTAGAAGACAGCGTGACCCAGCGGGAAATGATTACTGACCTGCTAAAAGGCAGCGGACTCGA
TGTCACCGTGGCTAGCGATGGTGTAGAAGCGCTAGAACAAATAGAAGGTCATAGCCCTGACCTAGTGGTTCTCGACATCG
TAATGCCCCGCATGAACGGATACGAGGTCTGCCGACAAATCAAAGCCAATCCCAAAACTCAAAACATCCCCGTTGTAATG
TGTTCCTCTAAAGGGGAAGAATTCGATCGCTATTGGGGCATGAAGCAGGGTGCAGATGCATACATTGCAAAGCCGTTCCA
ACCAACCGAGTTAGTGGGCACGGTCAAGCAATTGCTGCGGGGATAG
ATGAGTAGAGTTTTGGTTGTAGAAGACAGCGTGACCCAGCGGGAAATGATTACTGACCTGCTAAAAGGCAGCGGACTCGA
TGTCACCGTGGCTAGCGATGGTGTAGAAGCGCTAGAACAAATAGAAGGTCATAGCCCTGACCTAGTGGTTCTCGACATCG
TAATGCCCCGCATGAACGGATACGAGGTCTGCCGACAAATCAAAGCCAATCCCAAAACTCAAAACATCCCCGTTGTAATG
TGTTCCTCTAAAGGGGAAGAATTCGATCGCTATTGGGGCATGAAGCAGGGTGCAGATGCATACATTGCAAAGCCGTTCCA
ACCAACCGAGTTAGTGGGCACGGTCAAGCAATTGCTGCGGGGATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
75.207 |
100 |
0.752 |
| pilG | Acinetobacter baumannii strain A118 |
43.478 |
95.041 |
0.413 |
| micA | Streptococcus pneumoniae Cp1015 |
40 |
99.174 |
0.397 |
| chpA | Acinetobacter baumannii strain A118 |
41.379 |
95.868 |
0.397 |
| vicR | Streptococcus mutans UA159 |
38.333 |
99.174 |
0.38 |
| pilL-C | Synechocystis sp. PCC 6803 |
36.364 |
100 |
0.364 |