Detailed information NTG0067643

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: G6M96_RS00255
• Genome accession: NZ_AP022362
• Coordinates: 41421..42446 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain E302
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 36421..47446

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G6M96_RS00225 (EIMP302_00490)	zapB	36505..36750 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
G6M96_RS00230 (EIMP302_00500)	rraA	36835..37320 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
G6M96_RS00235 (EIMP302_00510)	menA	37413..38339 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
G6M96_RS00240 (EIMP302_00520)	hslU	38406..39737 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
G6M96_RS00245 (EIMP302_00530)	hslV	39747..40277 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
G6M96_RS00250 (EIMP302_00540)	ftsN	40370..41329 (-)	960	WP_000068834.1	cell division protein FtsN	-
G6M96_RS00255 (EIMP302_00550)	cytR	41421..42446 (-)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
G6M96_RS00260 (EIMP302_00560)	priA	42602..44800 (-)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
G6M96_RS00265 (EIMP302_00570)	rpmE	45003..45215 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
G6M96_RS00270 (EIMP302_00580)	yiiX	45276..45884 (-)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
G6M96_RS00275 (EIMP302_00590)	metJ	45944..46261 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=67643 G6M96_RS00255 WP_000644908.1 41421..42446(-) (cytR) [Escherichia coli strain E302]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=67643 G6M96_RS00255 WP_000644908.1 41421..42446(-) (cytR) [Escherichia coli strain E302]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625