Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | MUA32_RS09120 | Genome accession | NZ_CP094755 |
| Coordinates | 1890435..1890893 (-) | Length | 152 a.a. |
| NCBI ID | WP_262515785.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain IVB6242 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1878136..1918453 | 1890435..1890893 | within | 0 |
Gene organization within MGE regions
Location: 1878136..1918453
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA32_RS08995 (MUA32_08985) | - | 1878136..1878513 (-) | 378 | WP_001036447.1 | DUF1433 domain-containing protein | - |
| MUA32_RS09000 (MUA32_08990) | - | 1878723..1879115 (-) | 393 | WP_086095596.1 | DUF1433 domain-containing protein | - |
| MUA32_RS09005 (MUA32_08995) | - | 1879254..1880825 (+) | 1572 | WP_001791234.1 | hypothetical protein | - |
| MUA32_RS09010 (MUA32_09000) | - | 1880840..1881139 (+) | 300 | WP_000095390.1 | WXG100 family type VII secretion target | - |
| MUA32_RS09015 (MUA32_09005) | - | 1881401..1882984 (-) | 1584 | WP_262515770.1 | PBSX family phage terminase large subunit | - |
| MUA32_RS09020 (MUA32_09010) | - | 1882971..1883411 (-) | 441 | WP_001003271.1 | terminase small subunit | - |
| MUA32_RS09025 (MUA32_09015) | - | 1883598..1884020 (-) | 423 | WP_000162699.1 | RinA family phage transcriptional activator | - |
| MUA32_RS09030 (MUA32_09020) | - | 1884044..1884190 (-) | 147 | WP_262515773.1 | hypothetical protein | - |
| MUA32_RS09035 (MUA32_09025) | rinB | 1884191..1884364 (-) | 174 | WP_250406052.1 | transcriptional activator RinB | - |
| MUA32_RS09040 (MUA32_09030) | - | 1884361..1884747 (-) | 387 | WP_054189578.1 | hypothetical protein | - |
| MUA32_RS09045 (MUA32_09035) | - | 1884740..1884976 (-) | 237 | WP_103193023.1 | hypothetical protein | - |
| MUA32_RS09050 (MUA32_09040) | - | 1885001..1885237 (-) | 237 | WP_262515775.1 | DUF1381 domain-containing protein | - |
| MUA32_RS09055 (MUA32_09045) | - | 1885234..1885479 (-) | 246 | WP_000120375.1 | hypothetical protein | - |
| MUA32_RS09060 (MUA32_09050) | - | 1885516..1886025 (-) | 510 | Protein_1781 | dUTP diphosphatase | - |
| MUA32_RS09065 (MUA32_09055) | - | 1886018..1886266 (-) | 249 | WP_262515777.1 | DUF1024 family protein | - |
| MUA32_RS09070 (MUA32_09060) | - | 1886259..1886522 (-) | 264 | WP_262515778.1 | hypothetical protein | - |
| MUA32_RS09075 (MUA32_09065) | - | 1886537..1886779 (-) | 243 | WP_252570619.1 | phi PVL orf 51-like protein | - |
| MUA32_RS09080 (MUA32_09070) | - | 1886783..1887142 (-) | 360 | WP_031824891.1 | SA1788 family PVL leukocidin-associated protein | - |
| MUA32_RS09085 (MUA32_09075) | - | 1887143..1887328 (-) | 186 | WP_001187244.1 | DUF3113 family protein | - |
| MUA32_RS09090 (MUA32_09080) | - | 1887333..1887737 (-) | 405 | WP_031895072.1 | DUF1064 domain-containing protein | - |
| MUA32_RS09095 (MUA32_09085) | - | 1887748..1887969 (-) | 222 | WP_001123688.1 | DUF3269 family protein | - |
| MUA32_RS09100 (MUA32_09090) | - | 1887982..1888140 (-) | 159 | WP_262515781.1 | hypothetical protein | - |
| MUA32_RS09105 (MUA32_09095) | - | 1888137..1888922 (-) | 786 | WP_262515782.1 | ATP-binding protein | - |
| MUA32_RS09110 (MUA32_09100) | - | 1888935..1889756 (-) | 822 | WP_162642963.1 | phage replisome organizer N-terminal domain-containing protein | - |
| MUA32_RS09115 (MUA32_09105) | - | 1889728..1890423 (-) | 696 | WP_262515784.1 | putative HNHc nuclease | - |
| MUA32_RS09120 (MUA32_09110) | ssbA | 1890435..1890893 (-) | 459 | WP_262515785.1 | single-stranded DNA-binding protein | Machinery gene |
| MUA32_RS09125 (MUA32_09115) | - | 1890893..1891531 (-) | 639 | WP_262515786.1 | ERF family protein | - |
| MUA32_RS09130 (MUA32_09120) | - | 1891531..1892010 (-) | 480 | WP_262515787.1 | siphovirus Gp157 family protein | - |
| MUA32_RS09135 (MUA32_09125) | - | 1892025..1892285 (-) | 261 | WP_045178961.1 | DUF1108 family protein | - |
| MUA32_RS09140 (MUA32_09130) | - | 1892349..1892663 (-) | 315 | WP_252592197.1 | XRE family transcriptional regulator | - |
| MUA32_RS09145 (MUA32_09135) | - | 1892668..1892838 (-) | 171 | WP_000048123.1 | DUF1270 domain-containing protein | - |
| MUA32_RS09150 (MUA32_09140) | - | 1892852..1893061 (-) | 210 | WP_000455728.1 | hypothetical protein | - |
| MUA32_RS09155 (MUA32_09145) | - | 1893086..1893811 (-) | 726 | WP_015978381.1 | phage repressor protein | - |
| MUA32_RS09160 (MUA32_09150) | - | 1893850..1894059 (-) | 210 | WP_001114715.1 | helix-turn-helix transcriptional regulator | - |
| MUA32_RS09165 (MUA32_09155) | - | 1894222..1894548 (+) | 327 | WP_000455972.1 | helix-turn-helix domain-containing protein | - |
| MUA32_RS09170 (MUA32_09160) | - | 1894570..1895028 (+) | 459 | WP_262515792.1 | ImmA/IrrE family metallo-endopeptidase | - |
| MUA32_RS09175 (MUA32_09165) | - | 1895047..1895967 (+) | 921 | WP_262515793.1 | DUF5067 domain-containing protein | - |
| MUA32_RS09180 (MUA32_09170) | - | 1896215..1897264 (+) | 1050 | WP_262515794.1 | site-specific integrase | - |
| MUA32_RS09225 (MUA32_09215) | - | 1898541..1899095 (-) | 555 | WP_000132893.1 | alpha/beta hydrolase | - |
| MUA32_RS09230 (MUA32_09220) | hemY | 1899415..1900815 (-) | 1401 | WP_000167535.1 | protoporphyrinogen oxidase | - |
| MUA32_RS09235 (MUA32_09225) | hemH | 1900839..1901762 (-) | 924 | WP_000162875.1 | ferrochelatase | - |
| MUA32_RS09240 (MUA32_09230) | hemE | 1901820..1902857 (-) | 1038 | WP_000233541.1 | uroporphyrinogen decarboxylase | - |
| MUA32_RS09245 (MUA32_09235) | - | 1902847..1902933 (-) | 87 | WP_031875110.1 | hypothetical protein | - |
| MUA32_RS09250 (MUA32_09240) | traP | 1903119..1903622 (+) | 504 | WP_000737983.1 | signal transduction protein TRAP | - |
| MUA32_RS09255 (MUA32_09245) | ecsB | 1903746..1904969 (-) | 1224 | WP_001245764.1 | ABC transporter permease EcsB | - |
| MUA32_RS09260 (MUA32_09250) | ecsA | 1904962..1905702 (-) | 741 | WP_000216874.1 | ABC transporter ATP-binding protein EcsA | - |
| MUA32_RS09265 (MUA32_09255) | - | 1905836..1906258 (+) | 423 | WP_000004981.1 | HIT family protein | - |
| MUA32_RS09270 (MUA32_09260) | - | 1906400..1906765 (+) | 366 | WP_000648118.1 | YtxH domain-containing protein | - |
| MUA32_RS09275 (MUA32_09265) | - | 1907498..1908055 (+) | 558 | WP_000477959.1 | DUF3267 domain-containing protein | - |
| MUA32_RS09280 (MUA32_09270) | - | 1908260..1909222 (+) | 963 | WP_000782130.1 | foldase protein PrsA | - |
| MUA32_RS09285 (MUA32_09275) | yhaM | 1909343..1910284 (-) | 942 | WP_001244175.1 | 3'-5' exoribonuclease YhaM | - |
| MUA32_RS09290 (MUA32_09280) | - | 1910281..1913217 (-) | 2937 | WP_000584639.1 | ATP-binding protein | - |
| MUA32_RS09295 (MUA32_09285) | - | 1913207..1914403 (-) | 1197 | WP_000238227.1 | exonuclease SbcCD subunit D | - |
| MUA32_RS14245 | - | 1914700..1914807 (-) | 108 | WP_031788451.1 | hypothetical protein | - |
| MUA32_RS09300 (MUA32_09290) | - | 1915292..1915636 (-) | 345 | WP_000290301.1 | YlbF/YmcA family competence regulator | - |
| MUA32_RS09305 (MUA32_09295) | - | 1915705..1916829 (-) | 1125 | WP_000992513.1 | DUF445 domain-containing protein | - |
| MUA32_RS09310 (MUA32_09300) | - | 1917008..1917472 (-) | 465 | WP_000375864.1 | helix-turn-helix transcriptional regulator | - |
| MUA32_RS09315 (MUA32_09305) | - | 1917830..1918453 (-) | 624 | WP_001045133.1 | response regulator transcription factor | - |
Sequence
Protein
Download Length: 152 a.a. Molecular weight: 17239.80 Da Isoelectric Point: 4.7187
>NTDB_id=672011 MUA32_RS09120 WP_262515785.1 1890435..1890893(-) (ssbA) [Staphylococcus aureus strain IVB6242]
MLNRTVLVGRLTKDPEYRTTPNGVSVTTFTIAVNRTFTNAQGEREADFINCVTFRKQAENVNNYLSKGSLAGVDGRLQSR
DYENQEGRRVFVTEVVCDSVQFLEPKNNNQQQNDNYQQQNNAYNAPQNRQQSNNPFANANGPIEITDDDLPF
MLNRTVLVGRLTKDPEYRTTPNGVSVTTFTIAVNRTFTNAQGEREADFINCVTFRKQAENVNNYLSKGSLAGVDGRLQSR
DYENQEGRRVFVTEVVCDSVQFLEPKNNNQQQNDNYQQQNNAYNAPQNRQQSNNPFANANGPIEITDDDLPF
Nucleotide
Download Length: 459 bp
>NTDB_id=672011 MUA32_RS09120 WP_262515785.1 1890435..1890893(-) (ssbA) [Staphylococcus aureus strain IVB6242]
ATGTTAAACAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAACGCCGAATGGTGTGAGTGTTAC
CACTTTCACTATCGCAGTTAACAGAACATTTACTAACGCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTT
TTAGAAAACAAGCAGAAAATGTAAATAATTATTTATCCAAAGGGTCATTAGCTGGCGTTGATGGACGTTTACAATCCCGT
GATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACAAAATGACAATTATCAACAACAGAATAATGCATATAACGCACCACAGAATAGACAACAATCAAATA
ACCCGTTCGCTAATGCTAATGGTCCTATAGAAATCACTGACGATGATTTACCTTTCTAG
ATGTTAAACAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAACGCCGAATGGTGTGAGTGTTAC
CACTTTCACTATCGCAGTTAACAGAACATTTACTAACGCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTT
TTAGAAAACAAGCAGAAAATGTAAATAATTATTTATCCAAAGGGTCATTAGCTGGCGTTGATGGACGTTTACAATCCCGT
GATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACAAAATGACAATTATCAACAACAGAATAATGCATATAACGCACCACAGAATAGACAACAATCAAATA
ACCCGTTCGCTAATGCTAATGGTCCTATAGAAATCACTGACGATGATTTACCTTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
61.628 |
100 |
0.697 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
52.353 |
100 |
0.586 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
69.737 |
0.401 |
| ssb | Glaesserella parasuis strain SC1401 |
33.333 |
100 |
0.388 |
| ssb | Neisseria meningitidis MC58 |
32.759 |
100 |
0.375 |
| ssb | Neisseria gonorrhoeae MS11 |
32.759 |
100 |
0.375 |