Detailed information NTG0670162

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: MST18_RS01540
• Genome accession: NZ_CP094555
• Coordinates: 324849..325907 (+)
• Length: 352 a.a.
• NCBI ID: WP_078192532.1
• Uniprot ID: -
• Organism: Acinetobacter sp. YH12068_T
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 319849..330907

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MST18_RS01525 (MST18_01525)	mraY	320091..321209 (+)	1119	WP_078189386.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
MST18_RS01530 (MST18_01530)	-	321286..322089 (+)	804	WP_180133233.1	putative RNA methyltransferase	-
MST18_RS01535 (MST18_01535)	ponA	322143..324683 (-)	2541	WP_180133231.1	penicillin-binding protein PBP1a	-
MST18_RS01540 (MST18_01540)	comM	324849..325907 (+)	1059	WP_078192532.1	pilus assembly protein PilM	Machinery gene
MST18_RS01545 (MST18_01545)	pilN	325907..326593 (+)	687	WP_078189382.1	PilN domain-containing protein	Machinery gene
MST18_RS01550 (MST18_01550)	pilO	326590..327312 (+)	723	WP_180133229.1	type 4a pilus biogenesis protein PilO	Machinery gene
MST18_RS01555 (MST18_01555)	pilP	327309..327836 (+)	528	WP_078192530.1	pilus assembly protein PilP	Machinery gene
MST18_RS01560 (MST18_01560)	pilQ	327898..330012 (+)	2115	WP_180133283.1	type IV pilus secretin PilQ	Machinery gene
MST18_RS01565 (MST18_01565)	aroK	330049..330594 (+)	546	WP_078189378.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 38940.56 Da
• Isoelectric Point: 4.4858

>NTDB_id=670162 MST18_RS01540 WP_078192532.1 324849..325907(+) (comM) [Acinetobacter sp. YH12068_T]
MLRLYRKPNKGLIGVDISSTSVKVLELSVKSGRYWVESYALVPLPEGSVVEKNILNPEAVGDCLERAINLANTQTTNAAL
AVPTSMVITKIIEMDADMNDDEREIQIRDDAEQYIPFPLDEASLDFEVLPDRLSNPNRVNVLLVATRIENVEARAEVIQL
AGLTPKIGDVESFAIENAFKVFSDTLPMGVNTVGILDIGHSMTTLSVMQNNKVIYTREQVFGGKQLTQEIQNRYALSFEE
AGRAKKTRALPDDYDIEVLEPFLEAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=670162 MST18_RS01540 WP_078192532.1 324849..325907(+) (comM) [Acinetobacter sp. YH12068_T]
GTGCTCAGGTTATATCGTAAGCCAAATAAGGGGTTAATAGGAGTAGATATTAGTTCGACTTCTGTTAAGGTTTTGGAACT
TTCTGTAAAGAGTGGGCGGTATTGGGTAGAAAGCTATGCTTTGGTGCCATTACCAGAAGGAAGTGTTGTTGAAAAGAACA
TATTGAATCCGGAAGCTGTCGGTGACTGTTTAGAGCGCGCAATTAATTTGGCCAATACGCAGACCACTAATGCAGCTTTG
GCGGTTCCAACGTCGATGGTGATTACAAAAATCATCGAAATGGACGCAGATATGAACGATGATGAACGTGAAATTCAGAT
TCGTGATGATGCTGAGCAATATATTCCGTTCCCACTTGATGAAGCGAGCCTTGATTTTGAGGTCTTGCCAGATCGTCTGT
CCAACCCAAATCGTGTCAATGTTTTGCTTGTCGCTACGCGTATTGAAAATGTCGAAGCGCGTGCGGAAGTCATTCAGCTT
GCTGGTCTTACACCAAAAATTGGCGATGTAGAAAGCTTTGCAATTGAAAATGCGTTTAAAGTTTTCTCAGATACTTTGCC
AATGGGTGTGAATACCGTGGGTATTTTAGATATTGGTCATAGTATGACGACCTTATCTGTCATGCAGAATAACAAAGTGA
TTTATACCCGTGAGCAAGTGTTTGGTGGCAAACAATTGACACAGGAAATTCAAAATCGCTATGCATTGTCTTTCGAAGAA
GCTGGTCGTGCGAAAAAAACACGTGCCTTGCCAGATGATTATGATATCGAAGTCTTAGAACCCTTCTTAGAAGCTGTCGT
TCAACAAGCAGCACGTTCTTTACAGTTCTTTTTCTCATCTTCACAGTTCAACGAAATTGACCATATTTTATTGGCAGGGG
GGAATGCCAATATTCCGGGTCTTGCAAAATTACTTCAACAAAAATTGGGTTACCGCGTCACGATTGCCAATCCATTCTTA
CAAATGGGTTTTTCACCTCAAATTGATATTAAAAAAATTGAAAATGATGCCTCATCACTCATGGTGGCATGCGGTCTAGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	84.943	100	0.849
pilM	Acinetobacter baumannii D1279779	84.659	100	0.847
comM	Acinetobacter baylyi ADP1	79.261	100	0.793
pilM	Legionella pneumophila strain ERS1305867	40.678	100	0.409