Detailed information NTG0669525

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: MRY16_RS01310
• Genome accession: NZ_CP094445
• Coordinates: 283018..284076 (+)
• Length: 352 a.a.
• NCBI ID: WP_243483867.1
• Uniprot ID: -
• Organism: Acinetobacter junii strain A2-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 278018..289076

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MRY16_RS01295 (MRY16_01295)	mraY	278270..279388 (+)	1119	WP_004909640.1	phospho-N-acetylmuramoyl-pentapeptide- transferase	-
MRY16_RS01300 (MRY16_01300)	-	279443..280261 (+)	819	WP_004964610.1	putative RNA methyltransferase	-
MRY16_RS01305 (MRY16_01305)	ponA	280276..282855 (-)	2580	WP_243483865.1	penicillin-binding protein PBP1a	-
MRY16_RS01310 (MRY16_01310)	comM	283018..284076 (+)	1059	WP_243483867.1	pilus assembly protein PilM	Machinery gene
MRY16_RS01315 (MRY16_01315)	pilN	284076..284720 (+)	645	WP_243483869.1	PilN domain-containing protein	Machinery gene
MRY16_RS01320 (MRY16_01320)	pilO	284717..285457 (+)	741	WP_234856565.1	type 4a pilus biogenesis protein PilO	Machinery gene
MRY16_RS01325 (MRY16_01325)	pilP	285457..285984 (+)	528	WP_243483872.1	pilus assembly protein PilP	Machinery gene
MRY16_RS01330 (MRY16_01330)	pilQ	286046..288172 (+)	2127	WP_243484854.1	type IV pilus secretin PilQ family protein	Machinery gene
MRY16_RS01335 (MRY16_01335)	aroK	288192..288752 (+)	561	WP_243483874.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39074.82 Da
• Isoelectric Point: 4.5976

>NTDB_id=669525 MRY16_RS01310 WP_243483867.1 283018..284076(+) (comM) [Acinetobacter junii strain A2-1]
MLRLYRKPNKGLVGVDISSTTVKLLELSVKNGRYWVESYALMPLPENSVVEKSILNPEAVGDALERVVNLANPHTTNVAI
AVPTSMVINKIIEMDADMTDDEREVQIRMDAEQYIPFPLDEVSLDFEVLADRLVNPNRVNVLLVATRTENVDSRVEVLEL
AGLKAKIAEVESYAMERAFSVFADTLPMGANTVGILDIGHTMTTLSVMQKGKIIYTREQVFGGKQLTQDVQNRYGLSFEE
AGRAKKERSLPDDYDTEVLEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQIDIKKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=669525 MRY16_RS01310 WP_243483867.1 283018..284076(+) (comM) [Acinetobacter junii strain A2-1]
GTGCTCAGGTTATATCGTAAACCAAATAAGGGGTTAGTGGGTGTCGATATTAGTTCGACAACTGTTAAGTTATTGGAACT
CTCTGTTAAGAACGGTCGATATTGGGTTGAAAGTTATGCATTGATGCCACTACCTGAAAATAGTGTGGTTGAGAAAAGCA
TTTTAAACCCAGAAGCAGTTGGCGACGCACTTGAACGAGTTGTTAATCTTGCAAACCCTCACACTACCAATGTGGCTATT
GCCGTGCCTACTTCGATGGTCATTAATAAGATCATCGAGATGGATGCTGACATGACGGATGATGAACGGGAAGTTCAAAT
TCGTATGGATGCAGAGCAATATATTCCATTCCCATTAGATGAAGTTAGTTTGGACTTTGAAGTCTTAGCTGATCGATTGG
TAAATCCTAATCGTGTCAATGTGTTATTAGTCGCTACGCGTACTGAGAATGTCGATTCACGTGTTGAAGTTCTTGAACTA
GCAGGTCTAAAGGCAAAGATTGCTGAAGTCGAAAGTTATGCGATGGAACGTGCTTTTAGTGTATTCGCTGATACGCTACC
TATGGGTGCGAATACAGTGGGTATTCTAGATATTGGTCATACGATGACGACGTTATCAGTCATGCAAAAAGGTAAAATTA
TCTATACTCGTGAGCAAGTGTTTGGTGGAAAACAACTTACTCAAGACGTTCAAAATCGCTATGGTTTATCTTTTGAAGAA
GCTGGTCGAGCTAAAAAAGAAAGAAGTTTGCCAGATGATTACGATACCGAAGTTTTAGAACCATTTCTTGATGCAGTTGT
GCAACAAGCTGCACGTTCGCTGCAATTCTTTTTCTCATCATCTCAATTTAATGAGATTGACCACATCCTGTTAGCAGGTG
GTAATGCCAATATTCCAGGTCTAGCTAAACTGTTGCAACAAAAGCTAGGTTATCGAGTAACGATTGCCAACCCATTTTTA
CAAATGGGCTTTTCTCCCCAAATCGATATCAAAAAAATAGAAAATGATGCCTCATCGTTGATGGTGGCATGTGGATTAGC
ATTGAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	88.068	100	0.881
pilM	Acinetobacter baumannii D1279779	88.068	100	0.881
comM	Acinetobacter baylyi ADP1	83.239	100	0.832
pilM	Legionella pneumophila strain ERS1305867	41.525	100	0.418