Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   MON40_RS02345 Genome accession   NZ_CP094241
Coordinates   500161..501657 (+) Length   498 a.a.
NCBI ID   WP_003780235.1    Uniprot ID   A0A9X5YRN2
Organism   Neisseria macacae ATCC 33926     
Function   ssDNA binding (predicted from homology)   
DNA processing

Genomic Context

Location: 495161..506657
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON40_RS02320 (MON40_02320) nqrM 495512..495733 (-) 222 WP_003757168.1 (Na+)-NQR maturation NqrM -
  MON40_RS02325 (MON40_02325) - 495773..496822 (-) 1050 WP_039863302.1 FAD:protein FMN transferase -
  MON40_RS02330 (MON40_02330) metK 497216..498385 (+) 1170 WP_039863293.1 methionine adenosyltransferase -
  MON40_RS02335 (MON40_02335) - 498563..499627 (+) 1065 WP_039863292.1 DUF1176 domain-containing protein -
  MON40_RS02340 (MON40_02340) - 499827..500147 (+) 321 WP_003780238.1 accessory factor UbiK family protein -
  MON40_RS02345 (MON40_02345) comM 500161..501657 (+) 1497 WP_003780235.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  MON40_RS02350 (MON40_02350) - 502115..503209 (+) 1095 WP_003780231.1 SPOR domain-containing protein -
  MON40_RS02355 (MON40_02355) dsbA1 503220..503864 (+) 645 WP_003780229.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  MON40_RS02360 (MON40_02360) - 504076..504900 (+) 825 WP_003780226.1 undecaprenyl-diphosphate phosphatase -
  MON40_RS02365 (MON40_02365) - 505154..505501 (-) 348 WP_003780223.1 hypothetical protein -
  MON40_RS02370 (MON40_02370) - 505508..505699 (-) 192 WP_003763364.1 zinc-finger domain-containing protein -
  MON40_RS02375 (MON40_02375) - 505864..506358 (+) 495 WP_039863291.1 DMP19 family protein -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 53536.60 Da        Isoelectric Point: 7.5925

>NTDB_id=668296 MON40_RS02345 WP_003780235.1 500161..501657(+) (comM) [Neisseria macacae ATCC 33926]
MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKESRDRVRAAIIQSGFDFPAKKITVNLAPADLPKESGR
FDLPIALGILAASGQIAPEKLAQYEFAGELALSGMLRPVRGALAMAWQGMQAGRSFVLPQENAEQAAVMRGITVYGARSL
GEVAAHLNGIEPLAQTACQVPQRSSENAKLPDLIDVKGQHTARLALEIAAAGGHSLLMMGPPGTGKSMLSQRLPGILPPL
TEDELVEVWALRSLLPNHQQQLDSHRPFRSPHHSASSAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPL
ENGEIHISRAARQAVYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSLSAAELMQQ
EAGESSAVVLARVIAARDKQYARQGKVNAALSVSELDTSARIQKEAQEALGSLLEKLSLSARSFHRIMRVARTLADLAGD
EEVGRSHVLKAVSFRRAL

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=668296 MON40_RS02345 WP_003780235.1 500161..501657(+) (comM) [Neisseria macacae ATCC 33926]
ATGTCGCTTGCCTTGGTTTACAGCCGCGCCTTGAGCGGCATGAATGCGCCGTTGGTCGAAGTGGAAGCCCACCTTGCCAA
CGGCCTGCCTCATTTCAATATCGTCGGATTGCCCGACACCGAAGTCAAAGAAAGCCGCGACCGTGTGCGCGCCGCCATCA
TCCAAAGCGGTTTCGACTTCCCCGCCAAAAAAATCACCGTCAACCTCGCCCCCGCCGACCTACCCAAAGAATCGGGGCGT
TTCGACCTGCCGATTGCGCTGGGCATCCTCGCCGCATCCGGGCAAATCGCACCCGAAAAGCTCGCGCAATACGAGTTTGC
CGGCGAACTGGCGCTTTCCGGCATGTTGCGCCCCGTGCGCGGCGCGTTGGCGATGGCATGGCAGGGTATGCAGGCGGGAC
GTTCTTTCGTCTTGCCGCAGGAAAACGCAGAGCAAGCCGCCGTGATGCGCGGCATTACCGTTTACGGTGCGCGTTCGTTA
GGTGAAGTCGCCGCCCATTTGAACGGCATCGAACCTTTGGCGCAAACCGCCTGCCAAGTCCCGCAGAGGTCGTCTGAAAA
CGCCAAACTGCCCGACCTCATTGATGTCAAGGGTCAACATACTGCCCGCCTTGCTTTGGAAATCGCTGCTGCGGGCGGAC
ACAGCCTCTTGATGATGGGCCCGCCGGGAACGGGCAAATCCATGCTTTCCCAACGGCTGCCCGGCATTCTGCCGCCTTTG
ACCGAAGACGAATTGGTCGAAGTGTGGGCGTTGCGTTCGCTCCTGCCCAATCATCAGCAACAACTCGACAGCCACCGTCC
TTTCCGCAGCCCGCACCACAGCGCCAGCTCGGCAGCCATGGTCGGCGGCGGTTCCGACCCGCGTCCGGGCGAAATTTCAT
TGGCGCATCACGGTGTTTTATTTTTGGACGAGCTGCCCGAGTTTGACCGCAAAGTTTTAGAAGTTTTGCGCGAACCTTTG
GAAAACGGCGAAATCCACATTTCCCGTGCGGCGCGCCAAGCCGTCTATCCCGCCAAATTCCAGCTTGTCGCCGCCATGAA
CCCGTGTCCTTGCGGTTATCTCGGGCATCCCGTCAAACCCTGCCGCTGCACGCCCGAAAGCGTCGCGCGTTACCGCAGTA
AAATTTCCGGCCCGCTGCTCGACCGCATCGATTTGACCATCGAAGTCCCCAGCCTGTCCGCCGCCGAACTGATGCAGCAG
GAAGCGGGGGAAAGCAGCGCCGTCGTGTTGGCGCGCGTGATCGCCGCCCGCGACAAGCAATACGCGCGGCAGGGCAAAGT
CAATGCCGCCTTGAGCGTCAGTGAACTCGACACGTCCGCCCGCATCCAAAAAGAAGCGCAGGAAGCCTTGGGCAGCCTGT
TGGAAAAACTCTCCCTCTCCGCCCGCAGCTTCCACCGCATCATGCGCGTGGCGCGTACACTGGCAGATTTGGCGGGCGAT
GAAGAAGTCGGCAGAAGCCATGTTTTGAAAGCCGTCAGCTTCCGCCGCGCGTTGTAA

Domains

Predicted by InterproScan.

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(192-396)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(403-495)

Subunit ChlI of Mg-chelatase (ChlI)

(21-142)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Vibrio cholerae strain A1552

53.586

100

0.54
  comM Vibrio campbellii strain DS40M4

52.6

100

0.528
  comM Glaesserella parasuis strain SC1401

49.402

100

0.498
  comM Haemophilus influenzae Rd KW20

49.203

100

0.496
  comM Legionella pneumophila str. Paris

47.316

100

0.478
  comM Legionella pneumophila strain ERS1305867

47.316

100

0.478
  RA0C_RS07335 Riemerella anatipestifer ATCC 11845 = DSM 15868

43.34

100

0.438

Multiple sequence alignment