Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   MON40_RS02355 Genome accession   NZ_CP094241
Coordinates   503220..503864 (+) Length   214 a.a.
NCBI ID   WP_003780229.1    Uniprot ID   -
Organism   Neisseria macacae ATCC 33926     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 498220..508864
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MON40_RS02335 (MON40_02335) - 498563..499627 (+) 1065 WP_039863292.1 DUF1176 domain-containing protein -
  MON40_RS02340 (MON40_02340) - 499827..500147 (+) 321 WP_003780238.1 accessory factor UbiK family protein -
  MON40_RS02345 (MON40_02345) comM 500161..501657 (+) 1497 WP_003780235.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  MON40_RS02350 (MON40_02350) - 502115..503209 (+) 1095 WP_003780231.1 SPOR domain-containing protein -
  MON40_RS02355 (MON40_02355) dsbA1 503220..503864 (+) 645 WP_003780229.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  MON40_RS02360 (MON40_02360) - 504076..504900 (+) 825 WP_003780226.1 undecaprenyl-diphosphate phosphatase -
  MON40_RS02365 (MON40_02365) - 505154..505501 (-) 348 WP_003780223.1 hypothetical protein -
  MON40_RS02370 (MON40_02370) - 505508..505699 (-) 192 WP_003763364.1 zinc-finger domain-containing protein -
  MON40_RS02375 (MON40_02375) - 505864..506358 (+) 495 WP_039863291.1 DMP19 family protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23497.18 Da        Isoelectric Point: 9.8822

>NTDB_id=668297 MON40_RS02355 WP_003780229.1 503220..503864(+) (dsbA1) [Neisseria macacae ATCC 33926]
MKRTTKPAAVLLSLALAFSASAQAAVEGVDYTVLNKPIPQRDASKIEVLEFFGYFCIHCQNFDPVLLSYSKTFPKDVYLR
TEHVVWMPEMLGLARVAAAVNASGLKYQANPAIFKAVHEQKINLADTATFKSWAAAQKSFDSKKLIAAYDAPASLAAAKK
MQSLTETYRIDGTPDVIVGGKYRVIFSSDWANGQKIIGELINKVRQEHPGKAAR

Nucleotide


Download         Length: 645 bp        

>NTDB_id=668297 MON40_RS02355 WP_003780229.1 503220..503864(+) (dsbA1) [Neisseria macacae ATCC 33926]
ATGAAACGGACAACCAAACCGGCAGCCGTCCTCCTCAGCCTCGCGCTTGCCTTTTCCGCAAGCGCGCAGGCTGCGGTCGA
AGGCGTGGATTACACGGTTTTGAACAAACCGATTCCGCAACGAGACGCATCCAAAATCGAAGTTTTGGAATTTTTCGGCT
ATTTCTGCATACATTGCCAAAACTTTGATCCCGTCTTGCTGTCATACAGCAAAACTTTCCCGAAAGACGTTTACCTGCGT
ACCGAACACGTCGTCTGGATGCCTGAAATGCTGGGCTTGGCGCGGGTTGCCGCGGCGGTTAACGCTTCGGGTTTGAAGTA
TCAGGCAAACCCCGCTATTTTCAAAGCCGTACACGAACAGAAAATCAATTTGGCGGATACCGCCACTTTCAAAAGCTGGG
CGGCGGCACAAAAAAGCTTTGACAGCAAAAAACTGATTGCCGCATACGACGCACCCGCCAGCCTCGCAGCCGCTAAAAAA
ATGCAAAGCCTGACCGAGACTTACCGTATCGACGGCACGCCGGACGTCATCGTCGGAGGCAAATATCGGGTCATATTCAG
CAGCGATTGGGCGAATGGGCAGAAAATCATAGGCGAGCTGATTAACAAAGTCCGCCAAGAGCATCCCGGCAAAGCCGCGC
GCTGA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(44-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

56.216

86.449

0.486
  dsbA2 Neisseria meningitidis MC58

56.593

85.047

0.481

Multiple sequence alignment