Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiC   Type   Regulator
Locus tag   MP387_RS01310 Genome accession   NZ_CP094226
Coordinates   249930..251426 (+) Length   498 a.a.
NCBI ID   WP_000759891.1    Uniprot ID   I0Q2A0
Organism   Streptococcus oralis strain 1648     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 244930..256426
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MP387_RS01290 (MP387_01290) endA 245090..245914 (+) 825 WP_242747114.1 DNA/RNA non-specific endonuclease Machinery gene
  MP387_RS01295 (MP387_01295) - 246050..247381 (+) 1332 WP_000390020.1 hemolysin family protein -
  MP387_RS01305 (MP387_01305) amiA3 247884..249863 (+) 1980 WP_242747116.1 peptide ABC transporter substrate-binding protein Regulator
  MP387_RS01310 (MP387_01310) amiC 249930..251426 (+) 1497 WP_000759891.1 ABC transporter permease Regulator
  MP387_RS01315 (MP387_01315) amiD 251426..252352 (+) 927 WP_000103692.1 oligopeptide ABC transporter permease OppC Regulator
  MP387_RS01320 (MP387_01320) amiE 252361..253428 (+) 1068 WP_242747119.1 ABC transporter ATP-binding protein Regulator
  MP387_RS01325 (MP387_01325) amiF 253439..254368 (+) 930 WP_001291308.1 ATP-binding cassette domain-containing protein Regulator
  MP387_RS01330 (MP387_01330) - 254457..255896 (-) 1440 WP_242747130.1 TrkH family potassium uptake protein -

Sequence

Protein


Download         Length: 498 a.a.        Molecular weight: 55727.14 Da        Isoelectric Point: 9.2425

>NTDB_id=668088 MP387_RS01310 WP_000759891.1 249930..251426(+) (amiC) [Streptococcus oralis strain 1648]
MKKYIFMRVLRSLLSIFLVTTLTYTIIYTMVPRKLIFKQDTNYNKIATTPDKRDNYENTVYERMGYIEYYDTKELQERAS
TMDSSVTVDANDTNKAIYEKYINQLGNGWTLGVFSESGQFYATREIPIFERVFKFYANLIDIDHPNKIQDPENPNLQRYL
RFENDPAIGWSLVGSGTKHKYLLYFNNQFPFVHQNFVNINLGDSYPTYANTPVLQVITQGQGQTKTSEVQFPTGKKTSSV
DIYSRTYKSPSQADAREVANYGKDDPYTATESNYQYPSMIASSAVAGLIGLIISYAIAIPLGSAMARHKNTWIDSFSTGA
LTFLLALPTIALVYIVRLIGSSIGLPDSFPILGAGDWRSYVLPAVILGLLGAPSTAIWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSGIPGAVIGVIGGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCISIFSLFVGD
IWMTMLDPRIKLTEKGGK

Nucleotide


Download         Length: 1497 bp        

>NTDB_id=668088 MP387_RS01310 WP_000759891.1 249930..251426(+) (amiC) [Streptococcus oralis strain 1648]
ATGAAGAAATATATTTTTATGCGTGTATTGCGTTCATTGTTGTCTATTTTCTTGGTGACAACCTTGACATACACAATTAT
TTATACGATGGTTCCTCGAAAATTGATTTTCAAGCAGGATACCAACTATAACAAGATTGCAACGACGCCGGATAAGCGGG
ATAATTATGAAAACACCGTTTATGAACGGATGGGTTATATCGAGTACTACGATACCAAAGAGTTGCAAGAAAGAGCGAGC
ACGATGGACTCATCTGTAACAGTGGATGCCAATGATACCAATAAGGCAATCTATGAAAAATACATCAACCAACTAGGAAA
TGGTTGGACACTCGGTGTGTTCTCAGAAAGTGGTCAATTCTATGCTACGCGTGAAATTCCAATTTTTGAACGTGTTTTCA
AATTCTATGCGAACTTGATTGATATTGATCATCCAAACAAAATTCAAGACCCTGAAAATCCAAACTTGCAACGTTATCTT
CGTTTTGAAAATGACCCTGCTATCGGTTGGTCATTGGTTGGTTCAGGTACAAAACACAAATACCTTTTGTATTTCAACAA
TCAATTCCCATTTGTACACCAAAACTTTGTGAACATTAACTTGGGAGATTCTTACCCAACTTATGCAAACACACCAGTGC
TTCAAGTTATCACACAAGGTCAGGGACAAACTAAGACATCAGAAGTTCAATTCCCTACAGGTAAAAAGACTTCATCTGTA
GATATTTACTCTCGTACCTACAAATCTCCAAGTCAAGCAGATGCGCGTGAAGTAGCCAACTATGGTAAAGACGATCCATA
TACAGCTACAGAAAGCAATTATCAATATCCTTCAATGATCGCAAGCTCAGCGGTTGCTGGTTTGATTGGTTTGATTATTT
CGTATGCGATTGCGATTCCACTTGGATCTGCTATGGCTCGCCACAAGAATACTTGGATTGATAGCTTCTCGACAGGTGCT
CTAACCTTCTTGCTTGCCCTTCCAACGATTGCCTTGGTTTATATCGTGCGCTTGATTGGATCATCTATCGGTCTGCCAGA
TTCATTTCCTATCTTGGGAGCTGGGGACTGGCGTTCATATGTCTTGCCAGCAGTCATTCTAGGTTTGCTGGGTGCACCAA
GTACAGCTATCTGGATTCGTCGTTACATGATCGACTTGCAATCTCAGGACTTCGTTCGTTTTGCTCGTGCAAAAGGTTTG
TCTGAAAAAGAAATTTCAAATAAACACATCTTTAAAAATGCCATGGTTCCTTTGGTTTCAGGTATTCCTGGTGCCGTAAT
CGGGGTTATTGGTGGTGCAACATTGACAGAAACAGTCTTCGCCTTCCCAGGTATGGGTAAAATGTTGATTGACTCTGTTA
AGGCATCAAATAACTCAATGGTAGTTGGTCTCGTCTTCATCTTCACATGTATTTCTATCTTCTCACTCTTTGTAGGAGAC
ATCTGGATGACCATGCTTGACCCACGTATTAAATTGACAGAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

Binding-protein-dependent transport system inner membrane component (BPD_transp_1)

(298-491)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0Q2A0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiC Streptococcus salivarius strain HSISS4

76.707

100

0.767
  amiC Streptococcus thermophilus LMG 18311

76.104

100

0.761
  amiC Streptococcus thermophilus LMD-9

75.904

100

0.759

Multiple sequence alignment