Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | OIC43_RS40665 | Genome accession | NZ_CP108876 |
| Coordinates | 9090250..9092796 (+) | Length | 848 a.a. |
| NCBI ID | WP_330436145.1 | Uniprot ID | - |
| Organism | Streptomyces sp. NBC_00825 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 9085250..9097796
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OIC43_RS40650 (OIC43_40635) | - | 9087252..9087971 (-) | 720 | WP_266693005.1 | hypothetical protein | - |
| OIC43_RS40655 (OIC43_40640) | - | 9088388..9089047 (+) | 660 | WP_266693006.1 | HAD family hydrolase | - |
| OIC43_RS40660 (OIC43_40645) | - | 9089117..9089887 (-) | 771 | WP_266693007.1 | hypothetical protein | - |
| OIC43_RS40665 (OIC43_40650) | clpC | 9090250..9092796 (+) | 2547 | WP_330436145.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| OIC43_RS40670 (OIC43_40655) | - | 9093034..9093813 (+) | 780 | WP_266772291.1 | serine protease | - |
| OIC43_RS40675 (OIC43_40665) | - | 9094793..9095296 (+) | 504 | WP_266693010.1 | hypothetical protein | - |
| OIC43_RS40680 (OIC43_40670) | - | 9095266..9096684 (+) | 1419 | WP_266693011.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 848 a.a. Molecular weight: 91911.35 Da Isoelectric Point: 4.6931
>NTDB_id=668089 OIC43_RS40665 WP_330436145.1 9090250..9092796(+) (clpC) [Streptomyces sp. NBC_00825]
MTMSSFGSFGGPDPFNDLLNRFFGMSPASSPPQMQRVPIGRLLTESARELIGRATTRATEDGSRDLDTEHLLWAATQVDP
ARTLLEQAGAVPDELGKRIAEVLPGESATPSAEPRLTPAAKRVLLHAYERSQAAGVSYIGPEHILGALLDTQESGAAKLL
GAYGTDTGKLRREADNAARADGTPAGGTSDTPTLDQYGRDLTEEAKAGKLDPVVGRAEEIEQTVEVLSRRSKNNPVLIGE
PGVGKTAIVEGIAQRVVAGDVPRTLKDKRVIALDLSGLVAGSQYRGQFEERLKNVIDEVSAAADSTILFIDELHTVVGAG
ASGEGAMDAGNMLKPALARGELHVVGATTIDEYRKHIEKDAALERRFQPVMVPEPTVEETIQILEGLRDSYEAHHQVRFA
DDALVAAAELSDRYISDRFLPDKAIDLMDQAGARVRLRSLGRSTEVVSREDKLAELKREKDEAVASEDFEKASGLKLQIA
ETEAELAGVEEQREGVMDVTTADIAEVVSRRTGIPVTQLTASEKEKLLKLEDALHSRVVGQDEAVTAIAQAVRRNRAGMG
DPNRPVGSFLFLGPTGVGKTELAKALAELLFGDENRMARFDMSEFQEKHTVSRLVGAPPGYVGHEEAGQLTEKVRRQPYS
VLLFDEVEKAHPDVFNTLLQVLDDGRLTDAQGRTVDFRHTVVIMTSNIGAQRILAHKGDVSEIRDDLMGDLRGHFPPEFL
NRVDETIIFHGLDKDDLGEIVDLMLDGSKRRVRAQDMELEITEAAKKLLVAHGHQPEFGARPLRRTIQTELDNRIASLLL
SGEAEPGDTIVADVKDNALVCSIRRPETSAETETGSETGPGTEAVAAE
MTMSSFGSFGGPDPFNDLLNRFFGMSPASSPPQMQRVPIGRLLTESARELIGRATTRATEDGSRDLDTEHLLWAATQVDP
ARTLLEQAGAVPDELGKRIAEVLPGESATPSAEPRLTPAAKRVLLHAYERSQAAGVSYIGPEHILGALLDTQESGAAKLL
GAYGTDTGKLRREADNAARADGTPAGGTSDTPTLDQYGRDLTEEAKAGKLDPVVGRAEEIEQTVEVLSRRSKNNPVLIGE
PGVGKTAIVEGIAQRVVAGDVPRTLKDKRVIALDLSGLVAGSQYRGQFEERLKNVIDEVSAAADSTILFIDELHTVVGAG
ASGEGAMDAGNMLKPALARGELHVVGATTIDEYRKHIEKDAALERRFQPVMVPEPTVEETIQILEGLRDSYEAHHQVRFA
DDALVAAAELSDRYISDRFLPDKAIDLMDQAGARVRLRSLGRSTEVVSREDKLAELKREKDEAVASEDFEKASGLKLQIA
ETEAELAGVEEQREGVMDVTTADIAEVVSRRTGIPVTQLTASEKEKLLKLEDALHSRVVGQDEAVTAIAQAVRRNRAGMG
DPNRPVGSFLFLGPTGVGKTELAKALAELLFGDENRMARFDMSEFQEKHTVSRLVGAPPGYVGHEEAGQLTEKVRRQPYS
VLLFDEVEKAHPDVFNTLLQVLDDGRLTDAQGRTVDFRHTVVIMTSNIGAQRILAHKGDVSEIRDDLMGDLRGHFPPEFL
NRVDETIIFHGLDKDDLGEIVDLMLDGSKRRVRAQDMELEITEAAKKLLVAHGHQPEFGARPLRRTIQTELDNRIASLLL
SGEAEPGDTIVADVKDNALVCSIRRPETSAETETGSETGPGTEAVAAE
Nucleotide
Download Length: 2547 bp
>NTDB_id=668089 OIC43_RS40665 WP_330436145.1 9090250..9092796(+) (clpC) [Streptomyces sp. NBC_00825]
ATGACCATGTCCTCCTTCGGCTCCTTCGGCGGCCCGGACCCGTTCAACGATCTGCTCAACCGGTTCTTCGGGATGTCCCC
GGCGTCCTCACCGCCACAGATGCAGCGGGTTCCCATCGGGCGGCTGCTGACCGAATCCGCCCGTGAGCTGATAGGCCGGG
CGACCACCCGCGCGACCGAGGACGGCAGCCGGGACCTGGACACCGAACACCTGCTGTGGGCCGCCACCCAGGTGGATCCG
GCGCGCACCCTGCTCGAACAGGCCGGGGCGGTCCCCGACGAGCTGGGCAAACGGATCGCGGAAGTCCTGCCGGGCGAGAG
CGCCACGCCGTCCGCGGAACCGAGGCTGACGCCGGCCGCCAAGCGCGTACTGCTGCATGCCTACGAGCGTTCGCAGGCGG
CCGGGGTCTCCTACATCGGGCCCGAGCACATCCTCGGCGCGCTGCTGGACACCCAGGAGTCCGGTGCGGCCAAGCTGCTC
GGTGCCTACGGCACGGACACCGGCAAACTGCGGCGCGAGGCGGACAACGCGGCACGGGCCGACGGCACCCCGGCGGGCGG
AACGAGCGACACCCCGACGCTCGACCAGTACGGACGCGACCTGACCGAGGAGGCGAAGGCCGGGAAACTCGATCCCGTGG
TCGGCCGGGCCGAGGAGATCGAGCAGACCGTGGAGGTTCTCTCGCGGCGCTCCAAGAACAACCCCGTGCTGATCGGTGAG
CCCGGCGTCGGCAAGACCGCGATCGTGGAGGGAATCGCCCAGCGCGTCGTGGCCGGGGACGTCCCCCGCACCCTCAAGGA
CAAGCGGGTGATCGCCCTGGACCTCTCCGGCCTGGTGGCGGGCTCCCAGTACCGCGGCCAGTTCGAGGAACGGCTCAAGA
ACGTCATCGACGAGGTCAGCGCCGCCGCGGACTCGACGATCCTGTTCATCGACGAGCTGCACACCGTGGTCGGCGCCGGA
GCGTCCGGCGAGGGCGCCATGGACGCCGGCAACATGCTCAAACCGGCGCTGGCCCGCGGTGAACTGCACGTCGTCGGCGC
GACGACCATCGACGAGTACCGCAAGCACATCGAGAAGGACGCCGCGCTGGAGCGCCGTTTCCAGCCCGTCATGGTGCCCG
AGCCGACGGTCGAGGAGACCATCCAGATCCTGGAGGGCCTGCGGGACTCCTACGAGGCCCACCACCAGGTCCGCTTCGCC
GACGACGCACTGGTGGCAGCGGCCGAACTGTCCGACCGCTACATCAGCGACCGCTTCCTGCCGGACAAGGCCATCGACCT
CATGGACCAGGCGGGCGCCAGGGTGCGGCTGCGGTCGCTCGGCAGGTCCACCGAGGTCGTCTCCCGCGAGGACAAGCTCG
CCGAGCTGAAGCGGGAGAAGGACGAAGCGGTGGCGTCCGAGGACTTCGAGAAGGCGTCCGGGCTGAAGCTCCAGATCGCG
GAGACGGAGGCCGAACTCGCCGGTGTCGAGGAACAGCGCGAGGGCGTCATGGACGTCACCACCGCCGACATCGCCGAAGT
CGTCTCCCGCCGCACCGGTATCCCGGTCACGCAGCTCACCGCCAGCGAGAAGGAGAAGCTCCTCAAGCTGGAGGACGCGC
TGCACTCCCGAGTGGTCGGTCAGGACGAGGCGGTCACCGCGATCGCGCAGGCGGTGCGCCGCAACCGGGCCGGAATGGGC
GACCCCAACCGCCCCGTCGGTTCCTTCCTCTTCCTCGGGCCCACCGGTGTGGGCAAGACCGAACTGGCCAAGGCGCTCGC
GGAGTTGCTCTTCGGCGACGAGAACCGCATGGCCCGCTTCGACATGAGCGAGTTCCAGGAGAAGCACACCGTCTCGCGGC
TCGTCGGCGCACCGCCCGGATACGTGGGCCACGAGGAGGCCGGCCAGCTGACGGAGAAGGTGCGCCGCCAGCCGTACAGC
GTGCTCCTGTTCGACGAGGTGGAAAAGGCCCACCCCGACGTGTTCAACACGCTGCTGCAAGTCCTCGACGACGGACGCCT
GACCGACGCACAGGGGCGCACGGTGGACTTCCGCCACACCGTCGTCATCATGACGTCCAACATCGGCGCCCAGCGCATCC
TCGCCCACAAGGGCGATGTCTCCGAGATCCGCGACGACCTGATGGGCGACCTGCGGGGCCACTTCCCGCCGGAGTTCCTC
AACCGAGTGGACGAGACGATCATCTTCCACGGCCTCGACAAGGACGACCTCGGCGAAATCGTCGACCTCATGCTCGACGG
CAGCAAGCGCCGCGTACGGGCCCAGGACATGGAGCTGGAGATCACGGAGGCAGCGAAGAAGCTCCTCGTCGCGCACGGCC
ACCAGCCGGAGTTCGGCGCCCGCCCGTTGCGCCGCACGATCCAGACCGAACTCGACAACCGGATCGCTTCCCTGCTGCTG
AGCGGCGAGGCGGAGCCGGGCGACACCATCGTCGCCGACGTGAAGGACAACGCCCTGGTCTGCTCGATCCGCCGTCCGGA
GACCTCTGCCGAGACCGAGACCGGGTCGGAGACCGGGCCCGGGACCGAGGCGGTCGCGGCCGAGTAG
ATGACCATGTCCTCCTTCGGCTCCTTCGGCGGCCCGGACCCGTTCAACGATCTGCTCAACCGGTTCTTCGGGATGTCCCC
GGCGTCCTCACCGCCACAGATGCAGCGGGTTCCCATCGGGCGGCTGCTGACCGAATCCGCCCGTGAGCTGATAGGCCGGG
CGACCACCCGCGCGACCGAGGACGGCAGCCGGGACCTGGACACCGAACACCTGCTGTGGGCCGCCACCCAGGTGGATCCG
GCGCGCACCCTGCTCGAACAGGCCGGGGCGGTCCCCGACGAGCTGGGCAAACGGATCGCGGAAGTCCTGCCGGGCGAGAG
CGCCACGCCGTCCGCGGAACCGAGGCTGACGCCGGCCGCCAAGCGCGTACTGCTGCATGCCTACGAGCGTTCGCAGGCGG
CCGGGGTCTCCTACATCGGGCCCGAGCACATCCTCGGCGCGCTGCTGGACACCCAGGAGTCCGGTGCGGCCAAGCTGCTC
GGTGCCTACGGCACGGACACCGGCAAACTGCGGCGCGAGGCGGACAACGCGGCACGGGCCGACGGCACCCCGGCGGGCGG
AACGAGCGACACCCCGACGCTCGACCAGTACGGACGCGACCTGACCGAGGAGGCGAAGGCCGGGAAACTCGATCCCGTGG
TCGGCCGGGCCGAGGAGATCGAGCAGACCGTGGAGGTTCTCTCGCGGCGCTCCAAGAACAACCCCGTGCTGATCGGTGAG
CCCGGCGTCGGCAAGACCGCGATCGTGGAGGGAATCGCCCAGCGCGTCGTGGCCGGGGACGTCCCCCGCACCCTCAAGGA
CAAGCGGGTGATCGCCCTGGACCTCTCCGGCCTGGTGGCGGGCTCCCAGTACCGCGGCCAGTTCGAGGAACGGCTCAAGA
ACGTCATCGACGAGGTCAGCGCCGCCGCGGACTCGACGATCCTGTTCATCGACGAGCTGCACACCGTGGTCGGCGCCGGA
GCGTCCGGCGAGGGCGCCATGGACGCCGGCAACATGCTCAAACCGGCGCTGGCCCGCGGTGAACTGCACGTCGTCGGCGC
GACGACCATCGACGAGTACCGCAAGCACATCGAGAAGGACGCCGCGCTGGAGCGCCGTTTCCAGCCCGTCATGGTGCCCG
AGCCGACGGTCGAGGAGACCATCCAGATCCTGGAGGGCCTGCGGGACTCCTACGAGGCCCACCACCAGGTCCGCTTCGCC
GACGACGCACTGGTGGCAGCGGCCGAACTGTCCGACCGCTACATCAGCGACCGCTTCCTGCCGGACAAGGCCATCGACCT
CATGGACCAGGCGGGCGCCAGGGTGCGGCTGCGGTCGCTCGGCAGGTCCACCGAGGTCGTCTCCCGCGAGGACAAGCTCG
CCGAGCTGAAGCGGGAGAAGGACGAAGCGGTGGCGTCCGAGGACTTCGAGAAGGCGTCCGGGCTGAAGCTCCAGATCGCG
GAGACGGAGGCCGAACTCGCCGGTGTCGAGGAACAGCGCGAGGGCGTCATGGACGTCACCACCGCCGACATCGCCGAAGT
CGTCTCCCGCCGCACCGGTATCCCGGTCACGCAGCTCACCGCCAGCGAGAAGGAGAAGCTCCTCAAGCTGGAGGACGCGC
TGCACTCCCGAGTGGTCGGTCAGGACGAGGCGGTCACCGCGATCGCGCAGGCGGTGCGCCGCAACCGGGCCGGAATGGGC
GACCCCAACCGCCCCGTCGGTTCCTTCCTCTTCCTCGGGCCCACCGGTGTGGGCAAGACCGAACTGGCCAAGGCGCTCGC
GGAGTTGCTCTTCGGCGACGAGAACCGCATGGCCCGCTTCGACATGAGCGAGTTCCAGGAGAAGCACACCGTCTCGCGGC
TCGTCGGCGCACCGCCCGGATACGTGGGCCACGAGGAGGCCGGCCAGCTGACGGAGAAGGTGCGCCGCCAGCCGTACAGC
GTGCTCCTGTTCGACGAGGTGGAAAAGGCCCACCCCGACGTGTTCAACACGCTGCTGCAAGTCCTCGACGACGGACGCCT
GACCGACGCACAGGGGCGCACGGTGGACTTCCGCCACACCGTCGTCATCATGACGTCCAACATCGGCGCCCAGCGCATCC
TCGCCCACAAGGGCGATGTCTCCGAGATCCGCGACGACCTGATGGGCGACCTGCGGGGCCACTTCCCGCCGGAGTTCCTC
AACCGAGTGGACGAGACGATCATCTTCCACGGCCTCGACAAGGACGACCTCGGCGAAATCGTCGACCTCATGCTCGACGG
CAGCAAGCGCCGCGTACGGGCCCAGGACATGGAGCTGGAGATCACGGAGGCAGCGAAGAAGCTCCTCGTCGCGCACGGCC
ACCAGCCGGAGTTCGGCGCCCGCCCGTTGCGCCGCACGATCCAGACCGAACTCGACAACCGGATCGCTTCCCTGCTGCTG
AGCGGCGAGGCGGAGCCGGGCGACACCATCGTCGCCGACGTGAAGGACAACGCCCTGGTCTGCTCGATCCGCCGTCCGGA
GACCTCTGCCGAGACCGAGACCGGGTCGGAGACCGGGCCCGGGACCGAGGCGGTCGCGGCCGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
52.553 |
94.693 |
0.498 |
| clpC | Streptococcus pneumoniae TIGR4 |
43.149 |
98.113 |
0.423 |
| clpC | Streptococcus pneumoniae D39 |
43.029 |
98.113 |
0.422 |
| clpC | Streptococcus pneumoniae Rx1 |
43.029 |
98.113 |
0.422 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.404 |
86.321 |
0.409 |
| clpC | Streptococcus mutans UA159 |
41.446 |
97.877 |
0.406 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
53.499 |
75.825 |
0.406 |
| clpE | Streptococcus pneumoniae R6 |
51.735 |
78.184 |
0.404 |
| clpE | Streptococcus pneumoniae Rx1 |
51.735 |
78.184 |
0.404 |
| clpE | Streptococcus pneumoniae TIGR4 |
51.735 |
78.184 |
0.404 |
| clpE | Streptococcus pneumoniae D39 |
51.735 |
78.184 |
0.404 |
| clpC | Streptococcus thermophilus LMD-9 |
44.96 |
88.915 |
0.4 |
| clpE | Streptococcus mutans UA159 |
54.992 |
72.052 |
0.396 |
| clpC | Streptococcus thermophilus LMG 18311 |
44.562 |
88.915 |
0.396 |