Detailed information NTG0066588

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: SCSC_RS08245
• Genome accession: NZ_AP014647
• Coordinates: 1683632..1684069 (-)
• Length: 145 a.a.
• NCBI ID: WP_006270001.1
• Uniprot ID: -
• Organism: Streptococcus constellatus subsp. constellatus strain CCUG 24889
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1678632..1689069

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCSC_RS08225 (SCSC_1693)	glmS	1678838..1680652 (-)	1815	WP_006269970.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-
SCSC_RS08230 (SCSC_1694)	-	1681041..1682240 (-)	1200	WP_006269979.1	acetate kinase	-
SCSC_RS08235 (SCSC_1695)	comYH	1682287..1683240 (-)	954	WP_006269998.1	class I SAM-dependent methyltransferase	Machinery gene
SCSC_RS08240 (SCSC_1696)	comGG	1683325..1683651 (-)	327	WP_003070783.1	competence type IV pilus minor pilin ComGG	-
SCSC_RS08245 (SCSC_1697)	comGF/cglF	1683632..1684069 (-)	438	WP_006270001.1	competence type IV pilus minor pilin ComGF	Machinery gene
SCSC_RS08250 (SCSC_1698)	comGE/cglE	1684053..1684346 (-)	294	WP_006269989.1	competence type IV pilus minor pilin ComGE	Machinery gene
SCSC_RS08255 (SCSC_1699)	comYD	1684318..1684716 (-)	399	WP_006269995.1	competence type IV pilus minor pilin ComGD	Machinery gene
SCSC_RS08260 (SCSC_1700)	comYC	1684706..1685023 (-)	318	WP_006269985.1	competence type IV pilus major pilin ComGC	Machinery gene
SCSC_RS08265 (SCSC_1701)	comYB	1685020..1686042 (-)	1023	WP_037565861.1	competence type IV pilus assembly protein ComGB	Machinery gene
SCSC_RS08270 (SCSC_1702)	comYA	1685984..1686925 (-)	942	WP_006269992.1	competence type IV pilus ATPase ComGA	Machinery gene
SCSC_RS08275 (SCSC_1703)	-	1686995..1687360 (-)	366	WP_006269973.1	DUF1033 family protein	-
SCSC_RS08280 (SCSC_1704)	glnA	1687548..1688894 (-)	1347	WP_006269977.1	type I glutamate--ammonia ligase	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16897.63 Da
• Isoelectric Point: 10.6422

>NTDB_id=66588 SCSC_RS08245 WP_006270001.1 1683632..1684069(-) (comGF/cglF) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
MFKANKVKAFTLLEALVALFVISGSVLLFQSMTRLLASEVRARQHSEQREWLLFAHQLEAELIRSSFEKVENNRLYMKQD
GKTIAFGKSSGQDFRKTNANGKGYQPMIYNMKKAEISQKNELIHIRMTFKRGLEREFVYRVETKS

Nucleotide

• Length: 438 bp

>NTDB_id=66588 SCSC_RS08245 WP_006270001.1 1683632..1684069(-) (comGF/cglF) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
GTGTTCAAGGCAAATAAAGTGAAAGCTTTTACACTTTTAGAGGCTCTGGTTGCCCTCTTTGTAATCAGCGGGAGTGTGCT
ATTATTTCAATCGATGACGCGTCTTCTGGCTTCGGAGGTCCGAGCTCGACAACACAGTGAACAACGAGAATGGCTTTTGT
TTGCCCATCAATTAGAAGCGGAATTGATTCGTTCTTCATTTGAAAAAGTGGAGAATAATCGTTTATACATGAAGCAGGAC
GGTAAGACGATTGCATTTGGAAAGTCAAGTGGACAAGATTTCAGAAAAACCAATGCAAATGGGAAAGGCTATCAGCCTAT
GATTTATAATATGAAAAAAGCAGAAATCTCACAGAAAAATGAGCTGATTCATATCAGAATGACATTTAAGCGAGGATTGG
AAAGGGAGTTCGTCTATCGTGTGGAAACAAAGAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (39-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae R6	66.429	96.552	0.641
comGF/cglF	Streptococcus pneumoniae TIGR4	66.429	96.552	0.641
comGF/cglF	Streptococcus pneumoniae Rx1	66.429	96.552	0.641
comGF/cglF	Streptococcus pneumoniae D39	66.429	96.552	0.641
comGF/cglF	Streptococcus mitis NCTC 12261	65.714	96.552	0.634
comGF/cglF	Streptococcus mitis SK321	65.714	96.552	0.634
comYF	Streptococcus mutans UA159	43.972	97.241	0.428
comYF	Streptococcus mutans UA140	43.972	97.241	0.428
comGF	Lactococcus lactis subsp. cremoris KW2	42.963	93.103	0.4