Detailed information NTG0665152

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG331_RS32660
• Genome accession: NZ_CP108683
• Coordinates: 7088374..7089660 (+)
• Length: 428 a.a.
• NCBI ID: WP_406202816.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_01017
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7083374..7094660

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG331_RS32645 (OG331_32455)	tig	7085150..7086544 (+)	1395	WP_406202812.1	trigger factor	-
OG331_RS32650 (OG331_32460)	clpP	7086822..7087442 (+)	621	WP_328881648.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG331_RS32655 (OG331_32465)	clpP	7087513..7088193 (+)	681	WP_406202814.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG331_RS32660 (OG331_32470)	clpX	7088374..7089660 (+)	1287	WP_406202816.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG331_RS32665 (OG331_32475)	-	7089738..7090721 (-)	984	WP_406202818.1	hypothetical protein	-
OG331_RS32670 (OG331_32480)	-	7090858..7093482 (+)	2625	WP_406202820.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46877.68 Da
• Isoelectric Point: 4.7847

>NTDB_id=665152 OG331_RS32660 WP_406202816.1 7088374..7089660(+) (clpX) [Streptomyces sp. NBC_01017]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVRSNVNPTLIPRDARGRGSGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=665152 OG331_RS32660 WP_406202816.1 7088374..7089660(+) (clpX) [Streptomyces sp. NBC_01017]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCTGGTGTGTATATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACCA
GTGAGGTCCGCTGGGAGGAGCTGCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGCTACGTGGTCGGCCAGGAAGCA
GCCAAGAAGGCGCTCTCCGTCGCCGTCTACAACCACTACAAGCGCGTGCAGGCCGGCGAGAACGGCGGCGGTCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCCCAGA
CCCTGGCCCGCATGCTGAACGTCCCCTTCGCCATCGCGGACGCGACCGCGCTGACGGAGGCCGGGTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGTGAAAATCCGTCGATCACCCGGGACGTCAGCGGTGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCTTGGAGGGCACCACGGCCTCGGTCCCGCCGCAGGGCGGCCGTAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTCGAGAAGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGTGAGCTGGAGGCGAAGGACCAGTTCGAGGACGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGGTCGAGCCCCGCAATGCCCTCGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAACTCGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCCGACGTCGTTCGCTCGAACGTGAACCCGACGCTGATCCCCCGGGACGCGCGGGGGCGGGGGTCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.687	93.925	0.589
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	96.028	0.523