Detailed information    

insolico Bioinformatically predicted

Overview

Name   comGC   Type   Machinery gene
Locus tag   MNG38_RS12635 Genome accession   NZ_CP093289
Coordinates   2457371..2457667 (-) Length   98 a.a.
NCBI ID   WP_003230162.1    Uniprot ID   A0A809FGR8
Organism   Bacillus subtilis strain H2     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2452371..2462667
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNG38_RS12590 (MNG38_12590) tasA 2452779..2453564 (-) 786 WP_015251717.1 biofilm matrix protein TasA -
  MNG38_RS12595 (MNG38_12595) sipW 2453628..2454200 (-) 573 WP_003246088.1 signal peptidase I SipW -
  MNG38_RS12600 (MNG38_12600) tapA 2454184..2454945 (-) 762 WP_015251716.1 amyloid fiber anchoring/assembly protein TapA -
  MNG38_RS12605 (MNG38_12605) yqzG 2455217..2455543 (+) 327 WP_003246051.1 YqzG/YhdC family protein -
  MNG38_RS12610 (MNG38_12610) spoIITA 2455585..2455764 (-) 180 WP_029726723.1 YqzE family protein -
  MNG38_RS12615 (MNG38_12615) comGG 2455835..2456209 (-) 375 WP_015251714.1 ComG operon protein ComGG Machinery gene
  MNG38_RS12620 (MNG38_12620) comGF 2456210..2456593 (-) 384 WP_015251713.1 ComG operon protein ComGF Machinery gene
  MNG38_RS12625 (MNG38_12625) comGE 2456619..2456966 (-) 348 WP_021480020.1 ComG operon protein 5 Machinery gene
  MNG38_RS12630 (MNG38_12630) comGD 2456950..2457381 (-) 432 WP_004398628.1 comG operon protein ComGD Machinery gene
  MNG38_RS12635 (MNG38_12635) comGC 2457371..2457667 (-) 297 WP_003230162.1 comG operon protein ComGC Machinery gene
  MNG38_RS12640 (MNG38_12640) comGB 2457681..2458718 (-) 1038 WP_044052501.1 comG operon protein ComGB Machinery gene
  MNG38_RS12645 (MNG38_12645) comGA 2458705..2459775 (-) 1071 WP_242139143.1 competence protein ComGA Machinery gene
  MNG38_RS12650 (MNG38_12650) - 2459988..2460185 (-) 198 WP_014480259.1 CBS domain-containing protein -
  MNG38_RS12655 (MNG38_12655) corA 2460187..2461140 (-) 954 WP_015483432.1 magnesium transporter CorA -
  MNG38_RS12660 (MNG38_12660) yqhB 2461283..2462611 (+) 1329 WP_003230150.1 hemolysin family protein -

Sequence

Protein


Download         Length: 98 a.a.        Molecular weight: 10849.74 Da        Isoelectric Point: 6.7083

>NTDB_id=662993 MNG38_RS12635 WP_003230162.1 2457371..2457667(-) (comGC) [Bacillus subtilis strain H2]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKRIIITGGEVKVEH

Nucleotide


Download         Length: 297 bp        

>NTDB_id=662993 MNG38_RS12635 WP_003230162.1 2457371..2457667(-) (comGC) [Bacillus subtilis strain H2]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A809FGR8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGC Bacillus subtilis subsp. subtilis str. 168

100

100

1
  comGC Staphylococcus aureus MW2

41.304

93.878

0.388
  comGC Staphylococcus aureus N315

41.304

93.878

0.388
  comYC Streptococcus suis isolate S10

49.333

76.531

0.378