Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   SRT_RS10255 Genome accession   NZ_AP014612
Coordinates   2095659..2096834 (+) Length   391 a.a.
NCBI ID   WP_128833990.1    Uniprot ID   A0A1L7LMI0
Organism   Streptococcus troglodytae strain TKU 31     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2090659..2101834
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SRT_RS10235 - 2092753..2093706 (+) 954 WP_128832720.1 DDE-type integrase/transposase/recombinase -
  SRT_RS10245 (SRT_20790) - 2093937..2094599 (-) 663 WP_128833989.1 YoaK family protein -
  SRT_RS10250 (SRT_20800) rlmH 2094942..2095421 (-) 480 WP_128834079.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SRT_RS10255 (SRT_20810) htrA 2095659..2096834 (+) 1176 WP_128833990.1 S1C family serine protease Regulator
  SRT_RS10260 (SRT_20820) spo0J 2096903..2097673 (+) 771 WP_161940058.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 391 a.a.        Molecular weight: 41772.90 Da        Isoelectric Point: 7.1962

>NTDB_id=66197 SRT_RS10255 WP_128833990.1 2095659..2096834(+) (htrA) [Streptococcus troglodytae strain TKU 31]
MVYTFFSYFLTFILGVISTLTFNWITGNKSFSNNGKTTVSNVIYDTKSNTTKAVKNVKNTVVSVINYQKTDNSYYNYDSG
SQEKNKSEDGLGVYGEGSGVIYKKDGDSAYLVTNNHVVKDAEKLEIMMANGKKVVGKLVGSDTYSDLAVIKISSKYVTTV
AEFANSDKIKVGEPAIAIGSPLGSDYANSVTEGIVSSLSRTVTSQNENGETISTNAIQTDAAINPGNSGGALINIKGQVI
GINSSKIASSNNSNSGVAVEGMGFAIPSNDVVSIINQLEENGEVVRPALGISMANLSEASTSGRDTLKIPSDVTSGIVVL
STQSGMPADGKLKKYDVITEIDGKKVASISDLQSILYKHKKGDKIKLTFYREKDKQTVEIQLTKTSQDLNN

Nucleotide


Download         Length: 1176 bp        

>NTDB_id=66197 SRT_RS10255 WP_128833990.1 2095659..2096834(+) (htrA) [Streptococcus troglodytae strain TKU 31]
ATGGTTTATACCTTTTTTAGTTATTTTTTAACTTTTATTTTAGGAGTTATATCAACACTTACCTTTAATTGGATAACTGG
TAACAAATCGTTTTCTAACAATGGAAAAACAACTGTTAGTAATGTCATTTATGATACCAAATCCAACACTACCAAAGCTG
TCAAAAATGTCAAAAATACAGTTGTATCTGTCATCAATTATCAAAAAACAGATAATAGTTATTACAATTATGACAGCGGT
TCTCAAGAAAAAAATAAATCAGAGGATGGTCTAGGGGTCTACGGTGAAGGTTCTGGCGTTATCTACAAAAAAGATGGTGA
TAGTGCTTATTTAGTCACAAATAATCATGTCGTTAAAGATGCAGAAAAATTAGAAATCATGATGGCTAATGGTAAAAAAG
TTGTGGGTAAATTAGTAGGTTCTGATACTTATTCTGATCTGGCTGTTATTAAAATTTCTTCTAAGTATGTTACGACAGTT
GCTGAATTTGCTAATTCAGATAAAATAAAAGTTGGAGAACCAGCAATCGCTATTGGTAGCCCTTTAGGCAGTGATTATGC
TAATTCTGTAACAGAAGGAATTGTTTCAAGTCTCAGTCGTACAGTAACTTCACAAAATGAAAATGGCGAAACAATTTCAA
CTAATGCTATTCAAACAGACGCAGCTATTAACCCTGGTAATTCTGGTGGCGCTTTAATCAATATCAAGGGACAAGTTATT
GGTATCAATTCAAGTAAAATTGCATCAAGTAATAACTCAAATAGTGGCGTTGCTGTTGAAGGAATGGGCTTTGCAATTCC
TTCAAACGATGTTGTCTCTATTATTAATCAATTAGAAGAAAATGGTGAAGTTGTTAGACCCGCTCTTGGTATTTCAATGG
CTAATCTTAGTGAAGCTTCAACAAGTGGAAGAGATACTTTAAAAATACCAAGTGATGTCACAAGTGGTATTGTCGTTCTT
TCAACACAAAGTGGTATGCCAGCAGATGGGAAGCTGAAGAAATATGACGTCATTACAGAAATTGATGGAAAGAAAGTAGC
TTCTATCAGCGATCTTCAAAGTATTCTTTACAAACACAAAAAAGGAGATAAAATTAAACTCACTTTCTATCGCGAAAAAG
ATAAACAAACAGTTGAGATCCAATTAACTAAAACAAGTCAAGATTTGAATAACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1L7LMI0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

98.966

98.977

0.98

  htrA Streptococcus gordonii str. Challis substr. CH1

56.555

99.488

0.563

  htrA Streptococcus mitis NCTC 12261

55.352

97.954

0.542

  htrA Streptococcus pneumoniae Rx1

57.79

90.281

0.522

  htrA Streptococcus pneumoniae D39

57.79

90.281

0.522

  htrA Streptococcus pneumoniae R6

57.79

90.281

0.522

  htrA Streptococcus pneumoniae TIGR4

57.79

90.281

0.522


Multiple sequence alignment