Detailed information
Bioinformatically predicted
Overview
| Name | comR/comR1 | Type | Regulator |
| Locus tag | SRT_RS08385 | Genome accession | NZ_AP014612 |
| Coordinates | 1735300..1736202 (+) | Length | 300 a.a. |
| NCBI ID | WP_128833756.1 | Uniprot ID | A0A1L7LL97 |
| Organism | Streptococcus troglodytae strain TKU 31 | ||
| Function | repress natural transformation (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1730300..1741202
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SRT_RS08355 (SRT_17180) | tsaD | 1730854..1731864 (-) | 1011 | WP_128833752.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| SRT_RS08360 (SRT_17190) | rimI | 1731879..1732313 (-) | 435 | WP_002267466.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| SRT_RS08365 (SRT_17200) | tsaB | 1732313..1732999 (-) | 687 | WP_128833753.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| SRT_RS08370 (SRT_17210) | - | 1733010..1733468 (-) | 459 | WP_128833754.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| SRT_RS08375 (SRT_17220) | - | 1733645..1734691 (+) | 1047 | WP_128833755.1 | SDR family oxidoreductase | - |
| SRT_RS10895 | - | 1734712..1735042 (+) | 331 | Protein_1643 | aldo/keto reductase | - |
| SRT_RS08385 (SRT_17230) | comR/comR1 | 1735300..1736202 (+) | 903 | WP_128833756.1 | helix-turn-helix domain-containing protein | Regulator |
| SRT_RS10360 (SRT_17240) | - | 1736703..1736888 (-) | 186 | WP_162604150.1 | hypothetical protein | - |
| SRT_RS08395 (SRT_17250) | - | 1736818..1737057 (-) | 240 | WP_128833757.1 | hypothetical protein | - |
| SRT_RS10445 (SRT_17260) | - | 1737075..1737224 (-) | 150 | WP_167373730.1 | hypothetical protein | - |
| SRT_RS08400 (SRT_17280) | - | 1737429..1738667 (-) | 1239 | WP_128833758.1 | aminotransferase class III-fold pyridoxal phosphate-dependent enzyme | - |
| SRT_RS08405 (SRT_17290) | - | 1738683..1739591 (-) | 909 | WP_128833759.1 | hypothetical protein | - |
| SRT_RS08410 (SRT_17300) | - | 1739602..1740312 (-) | 711 | WP_128833760.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| SRT_RS08415 (SRT_17310) | - | 1740299..1741042 (-) | 744 | WP_128833761.1 | methyltransferase domain-containing protein | - |
Sequence
Protein
Download Length: 300 a.a. Molecular weight: 34838.10 Da Isoelectric Point: 4.4394
>NTDB_id=66187 SRT_RS08385 WP_128833756.1 1735300..1736202(+) (comR/comR1) [Streptococcus troglodytae strain TKU 31]
MTIKEDLGRRIKAERNRKQLTQSLLCGDEAKLTIRQLQRIEGGQSLPTLEKLEFIAERLGVKIANLLEGEDIQIPDHYWE
LKGQIVKFPTYADKERLQQKQELIEEIYDKYFDILPEDELLFLDLSENILESSHQKDIPNIEEIYDDALEQVLKKETFAF
NDYLYMSYFLQKCGKTAVYDHATFKLLEQKLLKQELTAEELYNIEFLIAVIEAASVHVLHDDYQNLLPLLEKAQLIIDKA
QLPTYKPALLELEAKYYINVVKDKEKAKELYQQALVMGEILGDPIIIADVKIEMANDGID
MTIKEDLGRRIKAERNRKQLTQSLLCGDEAKLTIRQLQRIEGGQSLPTLEKLEFIAERLGVKIANLLEGEDIQIPDHYWE
LKGQIVKFPTYADKERLQQKQELIEEIYDKYFDILPEDELLFLDLSENILESSHQKDIPNIEEIYDDALEQVLKKETFAF
NDYLYMSYFLQKCGKTAVYDHATFKLLEQKLLKQELTAEELYNIEFLIAVIEAASVHVLHDDYQNLLPLLEKAQLIIDKA
QLPTYKPALLELEAKYYINVVKDKEKAKELYQQALVMGEILGDPIIIADVKIEMANDGID
Nucleotide
Download Length: 903 bp
>NTDB_id=66187 SRT_RS08385 WP_128833756.1 1735300..1736202(+) (comR/comR1) [Streptococcus troglodytae strain TKU 31]
ATGACAATAAAAGAAGATTTAGGACGGCGGATTAAAGCAGAAAGGAATCGCAAGCAACTCACACAGAGCCTTTTGTGCGG
AGACGAAGCAAAGCTGACCATTCGTCAGCTTCAGCGGATTGAGGGCGGGCAGTCTTTGCCGACTTTAGAAAAATTAGAAT
TCATTGCTGAGCGTTTAGGAGTGAAAATCGCTAATTTGCTAGAAGGTGAGGACATCCAGATACCAGACCATTACTGGGAG
TTAAAGGGACAAATCGTGAAATTCCCTACCTATGCCGATAAGGAAAGGCTCCAGCAGAAGCAGGAGCTGATCGAAGAAAT
CTATGACAAATACTTTGACATCCTGCCCGAGGATGAACTGCTCTTTTTGGATCTGTCAGAGAATATCCTAGAGAGTTCCC
ATCAAAAGGACATTCCTAACATTGAGGAGATTTACGACGATGCCCTTGAGCAAGTCCTCAAAAAGGAGACTTTTGCCTTT
AATGACTATCTTTACATGAGCTATTTTTTACAGAAGTGCGGAAAAACAGCGGTCTATGATCACGCAACCTTTAAGCTGCT
TGAACAAAAATTGCTCAAGCAAGAGCTGACAGCAGAGGAACTTTATAACATTGAATTTTTGATTGCTGTTATTGAGGCTG
CTTCTGTTCATGTCCTTCATGATGATTACCAGAACCTTCTTCCTTTACTAGAGAAGGCTCAGCTAATTATCGATAAGGCT
CAGCTCCCCACCTACAAACCAGCACTTTTGGAGCTTGAAGCCAAGTACTATATAAATGTTGTCAAGGATAAGGAAAAAGC
CAAGGAACTCTACCAGCAAGCCTTGGTTATGGGCGAAATTCTCGGTGATCCTATTATCATTGCAGATGTTAAAATAGAGA
TGGCAAATGATGGGATAGACTAG
ATGACAATAAAAGAAGATTTAGGACGGCGGATTAAAGCAGAAAGGAATCGCAAGCAACTCACACAGAGCCTTTTGTGCGG
AGACGAAGCAAAGCTGACCATTCGTCAGCTTCAGCGGATTGAGGGCGGGCAGTCTTTGCCGACTTTAGAAAAATTAGAAT
TCATTGCTGAGCGTTTAGGAGTGAAAATCGCTAATTTGCTAGAAGGTGAGGACATCCAGATACCAGACCATTACTGGGAG
TTAAAGGGACAAATCGTGAAATTCCCTACCTATGCCGATAAGGAAAGGCTCCAGCAGAAGCAGGAGCTGATCGAAGAAAT
CTATGACAAATACTTTGACATCCTGCCCGAGGATGAACTGCTCTTTTTGGATCTGTCAGAGAATATCCTAGAGAGTTCCC
ATCAAAAGGACATTCCTAACATTGAGGAGATTTACGACGATGCCCTTGAGCAAGTCCTCAAAAAGGAGACTTTTGCCTTT
AATGACTATCTTTACATGAGCTATTTTTTACAGAAGTGCGGAAAAACAGCGGTCTATGATCACGCAACCTTTAAGCTGCT
TGAACAAAAATTGCTCAAGCAAGAGCTGACAGCAGAGGAACTTTATAACATTGAATTTTTGATTGCTGTTATTGAGGCTG
CTTCTGTTCATGTCCTTCATGATGATTACCAGAACCTTCTTCCTTTACTAGAGAAGGCTCAGCTAATTATCGATAAGGCT
CAGCTCCCCACCTACAAACCAGCACTTTTGGAGCTTGAAGCCAAGTACTATATAAATGTTGTCAAGGATAAGGAAAAAGC
CAAGGAACTCTACCAGCAAGCCTTGGTTATGGGCGAAATTCTCGGTGATCCTATTATCATTGCAGATGTTAAAATAGAGA
TGGCAAATGATGGGATAGACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comR/comR1 | Streptococcus sobrinus strain NIDR 6715-7 |
74 |
100 |
0.74 |
| comR/comR2 | Streptococcus sobrinus strain NIDR 6715-7 |
66.667 |
100 |
0.667 |
| comR | Streptococcus thermophilus LMD-9 |
40.468 |
99.667 |
0.403 |
| comR | Streptococcus thermophilus LMG 18311 |
40.468 |
99.667 |
0.403 |
| comR | Streptococcus salivarius strain HSISS4 |
40.468 |
99.667 |
0.403 |
| comR | Streptococcus salivarius SK126 |
39.465 |
99.667 |
0.393 |