Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ML603_RS09855 Genome accession   NZ_CP092887
Coordinates   1997373..1998593 (+) Length   406 a.a.
NCBI ID   WP_241067261.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain Karl     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1992373..2003593
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ML603_RS09830 (ML603_09830) - 1993315..1995891 (+) 2577 WP_241067260.1 YfhO family protein -
  ML603_RS09850 (ML603_09850) rlmH 1996684..1997163 (-) 480 WP_129555129.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ML603_RS09855 (ML603_09855) htrA 1997373..1998593 (+) 1221 WP_241067261.1 trypsin-like peptidase domain-containing protein Regulator
  ML603_RS09860 (ML603_09860) spo0J 1998709..1999482 (+) 774 WP_241067262.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 406 a.a.        Molecular weight: 42439.81 Da        Isoelectric Point: 5.2146

>NTDB_id=660955 ML603_RS09855 WP_241067261.1 1997373..1998593(+) (htrA) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
MPSMKHILKSLGILLIGFLGGLLAIFTFNATQQSSSTSHTGSATTSKMVFNNTTDTTKAVKVVQNAVVSVINYQADPSSS
LSNPYTKLFGENQTRENKDADLAIFSEGSGVIYRKDGDSAYVVTNNHVIDGAKRIEILMADGTKVVGELVGADTYSDLAV
VKIASDKIKTVAEFADSTKLNVGEVAIAIGSPLGTQYANSVTEGIVSSLSRTVTLKNEDGETVSTNAIQTDAAINPGNSG
GPLINIEGQVIGINSSKISSTPTGSNGNSGAVEGIGFAIPSSDVIKIIKQLETNGEVIRPALGISMVNLNDLSTNALSQI
NIPTGVTGGIVVASVQDGMPASGKLAQYDVITEIDGKAVNSISDLQSNLYGHDINDTIKVTFYRGTTKKKADITLTKTTQ
DLTKKQ

Nucleotide


Download         Length: 1221 bp        

>NTDB_id=660955 ML603_RS09855 WP_241067261.1 1997373..1998593(+) (htrA) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
ATGCCATCTATGAAACATATCTTAAAATCCTTAGGCATTTTACTCATTGGATTTTTAGGAGGATTGTTAGCAATTTTCAC
TTTTAATGCTACTCAACAGTCTTCCTCTACCTCACATACTGGTAGTGCGACGACGAGTAAGATGGTTTTTAATAATACTA
CTGACACAACAAAAGCGGTTAAAGTCGTTCAAAATGCAGTAGTATCAGTGATTAACTATCAAGCAGATCCTTCTTCATCT
CTTTCAAATCCCTACACAAAACTCTTTGGAGAAAATCAAACAAGAGAAAATAAAGATGCCGACTTAGCAATTTTTAGTGA
AGGTTCTGGTGTTATTTATCGAAAAGACGGTGATTCTGCATATGTTGTTACTAATAATCACGTCATTGACGGCGCAAAGC
GAATTGAAATTCTTATGGCAGACGGTACCAAAGTCGTAGGGGAGTTAGTTGGAGCTGATACTTACTCTGACTTAGCGGTT
GTTAAAATTGCCTCAGATAAAATTAAGACAGTTGCTGAATTTGCAGATTCTACTAAACTGAATGTCGGAGAAGTTGCTAT
CGCAATTGGTAGCCCATTAGGAACTCAGTATGCCAATTCTGTTACAGAAGGAATTGTTTCTAGTCTCAGTCGTACCGTCA
CCTTAAAAAATGAAGATGGGGAAACTGTTTCAACAAATGCCATTCAAACTGATGCTGCGATCAATCCCGGAAATTCTGGT
GGTCCGCTCATCAATATTGAAGGACAGGTTATTGGTATCAATTCAAGTAAAATTTCTTCTACCCCAACAGGAAGCAACGG
CAATAGTGGAGCGGTTGAAGGTATCGGTTTTGCTATTCCATCCAGTGATGTCATTAAAATCATTAAGCAATTAGAAACCA
ATGGTGAGGTTATCAGACCTGCCCTTGGAATCTCTATGGTTAATCTAAATGATTTATCAACGAATGCTCTCAGTCAAATT
AATATCCCTACTGGGGTGACGGGTGGTATTGTGGTCGCTTCTGTTCAAGATGGAATGCCAGCTAGTGGTAAACTTGCCCA
GTACGACGTTATTACTGAAATTGATGGTAAAGCCGTCAACTCAATCAGTGATCTTCAAAGCAACCTATACGGCCATGACA
TTAACGATACCATCAAGGTAACCTTTTATAGAGGGACAACCAAGAAAAAAGCAGATATTACCTTAACTAAAACAACCCAG
GATTTGACCAAAAAGCAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

60.945

99.015

0.603

  htrA Streptococcus mitis NCTC 12261

54.412

100

0.547

  htrA Streptococcus pneumoniae Rx1

54.412

100

0.547

  htrA Streptococcus pneumoniae TIGR4

54.412

100

0.547

  htrA Streptococcus pneumoniae D39

54.412

100

0.547

  htrA Streptococcus pneumoniae R6

54.412

100

0.547

  htrA Streptococcus gordonii str. Challis substr. CH1

54.95

99.507

0.547