Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ML603_RS09860 Genome accession   NZ_CP092887
Coordinates   1998709..1999482 (+) Length   257 a.a.
NCBI ID   WP_241067262.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain Karl     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1993709..2004482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ML603_RS09850 (ML603_09850) rlmH 1996684..1997163 (-) 480 WP_129555129.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ML603_RS09855 (ML603_09855) htrA 1997373..1998593 (+) 1221 WP_241067261.1 trypsin-like peptidase domain-containing protein Regulator
  ML603_RS09860 (ML603_09860) spo0J 1998709..1999482 (+) 774 WP_241067262.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 28886.54 Da        Isoelectric Point: 9.7853

>NTDB_id=660956 ML603_RS09860 WP_241067262.1 1998709..1999482(+) (spo0J) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
MTELLKSIPIEDIVANPYQPRLQFNQKELEDLANSIKANGLIQPIIVRKSDIFGYELVAGERRFKASKMAGLTKVPAIVK
NMSSLESMQQAIVENLQRADLNPIEEAKAYQLLIEKNQMTHEEVAKYMGKSRPYISNTLRLLQLPQTISKAVEEGDISAG
HARALLTLTDEKEQLVYANRIKNEGLSVRQIEHMVTPKLKTTPTSKNKNIFITSLEDQLAQSLGLPAKIKLKSTQSGQLL
LPFANQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=660956 ML603_RS09860 WP_241067262.1 1998709..1999482(+) (spo0J) [Streptococcus dysgalactiae subsp. equisimilis strain Karl]
ATGACTGAACTATTGAAATCTATTCCAATTGAAGATATCGTAGCCAATCCCTATCAACCAAGGCTACAGTTTAATCAAAA
GGAACTAGAAGATTTGGCTAATTCAATCAAGGCAAATGGACTTATTCAACCTATTATTGTTCGAAAATCTGACATCTTTG
GTTATGAATTAGTCGCAGGAGAACGACGCTTTAAGGCTTCTAAAATGGCTGGGCTAACAAAGGTACCTGCTATTGTCAAA
AACATGTCCTCTCTGGAAAGTATGCAACAAGCTATCGTAGAAAATTTACAACGGGCTGATTTAAATCCCATTGAAGAAGC
AAAAGCTTATCAGCTACTGATTGAAAAAAATCAAATGACGCATGAAGAGGTTGCTAAATATATGGGAAAATCAAGACCTT
ATATTAGCAATACTTTACGCCTACTGCAACTTCCGCAAACAATTAGTAAAGCAGTAGAAGAAGGAGACATTAGTGCAGGA
CACGCGCGTGCTCTTCTCACACTAACCGACGAAAAGGAACAGTTAGTTTACGCTAATAGAATCAAAAATGAAGGGTTAAG
TGTACGACAAATTGAGCATATGGTAACTCCAAAACTCAAAACCACCCCTACCTCAAAAAATAAAAATATTTTTATCACTT
CTTTAGAAGATCAACTGGCCCAATCTCTAGGGCTACCAGCCAAAATCAAATTGAAATCAACTCAGAGTGGTCAATTGCTA
TTACCATTTGCTAATCAAGAGGAATTAAACAGAATTATCAACAAGTTGCTTTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(147-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.812

99.611

0.576