Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   MIS46_RS00665 Genome accession   NZ_CP092358
Coordinates   115838..117040 (+) Length   400 a.a.
NCBI ID   WP_249442781.1    Uniprot ID   -
Organism   Wielerella bovis strain 09LB414     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 110838..122040
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MIS46_RS00645 (MIS46_00645) ffh 111516..112880 (+) 1365 WP_249442777.1 signal recognition particle protein -
  MIS46_RS00650 (MIS46_00650) - 113060..113677 (-) 618 WP_249442778.1 inner membrane CreD family protein -
  MIS46_RS00655 (MIS46_00655) - 113892..114572 (+) 681 WP_249442779.1 response regulator -
  MIS46_RS00660 (MIS46_00660) - 114566..115534 (+) 969 WP_249442780.1 histidine kinase dimerization/phospho-acceptor domain-containing protein -
  MIS46_RS00665 (MIS46_00665) dprA 115838..117040 (+) 1203 WP_249442781.1 DNA-processing protein DprA Machinery gene
  MIS46_RS00670 (MIS46_00670) tsf 117443..118297 (-) 855 WP_249442782.1 translation elongation factor Ts -
  MIS46_RS00675 (MIS46_00675) rpsB 118382..119110 (-) 729 WP_249442783.1 30S ribosomal protein S2 -
  MIS46_RS00680 (MIS46_00680) - 119383..120561 (+) 1179 WP_249442784.1 phosphoglycerate kinase -
  MIS46_RS00685 (MIS46_00685) radA 120649..122031 (+) 1383 WP_249442026.1 DNA repair protein RadA Machinery gene

Sequence


Protein


Download         Length: 400 a.a.        Molecular weight: 42751.60 Da        Isoelectric Point: 6.6151

>NTDB_id=656687 MIS46_RS00665 WP_249442781.1 115838..117040(+) (dprA) [Wielerella bovis strain 09LB414]
MTESERYAWLQLAFTPYVGAETFAQLLATFGTPQAALNAPADAIAQQGKHAKQAAAKWHDTTLARQATDAALTWVQQDGC
RLMLSCDDDYPALLAEGITAPPVLFLRGNTALLHQTSVGIVGSRHATPQAMRIAQDFGRALSEHNITVISGMAAGIDTAA
HMGALYGTGSTIAVWGTGIDRIYPASNQKLARDIADKGLIISEFPLETRPLAGNFPRRNRIIAAQSHAVLVVEAALESGS
LITARQAAEMGRDVMAIPGSIDNPHSKGCHKLIKEGAKLVECLDDILSELGHILPDKAYPQFSGSLKTSVKAHTKHNLST
KISTNPVMINNASFQAASTPITTIDTAHSLLQQMGYDPVHPDTLAENSSLSASDIYALLTEWELEGIVASLAGGRYQRIK

Nucleotide


Download         Length: 1203 bp        

>NTDB_id=656687 MIS46_RS00665 WP_249442781.1 115838..117040(+) (dprA) [Wielerella bovis strain 09LB414]
ATGACTGAATCCGAACGCTACGCATGGTTACAACTGGCTTTTACGCCCTATGTTGGCGCGGAAACTTTTGCGCAGTTGCT
GGCAACATTTGGCACACCGCAAGCAGCTTTGAATGCGCCAGCCGATGCCATCGCCCAGCAAGGCAAACATGCCAAACAAG
CAGCAGCAAAATGGCACGACACCACATTAGCACGACAAGCAACTGATGCCGCGCTGACTTGGGTACAACAAGATGGCTGC
CGTTTGATGCTGTCTTGCGATGACGATTATCCTGCGCTATTGGCAGAAGGCATCACTGCGCCACCCGTATTATTTTTGCG
TGGCAATACGGCATTGTTACATCAAACATCGGTTGGCATAGTCGGTAGTCGCCACGCGACACCACAAGCCATGCGGATTG
CCCAAGATTTTGGTAGGGCATTGAGTGAACATAATATTACGGTCATTTCAGGCATGGCAGCAGGCATTGATACTGCAGCA
CATATGGGCGCATTATATGGCACGGGTAGCACGATTGCCGTATGGGGAACAGGGATTGACCGCATTTATCCCGCATCCAA
CCAAAAATTGGCACGCGACATTGCCGACAAAGGTTTAATTATTTCCGAATTTCCTTTGGAAACCCGTCCATTGGCAGGCA
ATTTCCCGCGCCGCAACCGCATCATCGCCGCACAAAGCCACGCCGTTTTGGTGGTGGAAGCCGCATTGGAAAGTGGTTCG
TTGATTACCGCCAGACAAGCCGCCGAAATGGGGCGCGATGTGATGGCAATCCCAGGTTCCATAGACAATCCGCACAGCAA
AGGCTGCCACAAACTCATCAAAGAAGGGGCAAAATTAGTAGAATGTTTGGACGATATTTTGAGTGAATTGGGACATATTT
TGCCTGATAAGGCTTATCCACAATTTTCAGGCAGCCTGAAAACATCTGTTAAAGCACATACCAAACACAATTTATCCACA
AAAATATCCACAAATCCTGTGATGATAAATAATGCCAGTTTTCAGGCTGCCTCTACGCCCATTACAACAATAGATACGGC
TCATTCCTTGTTGCAACAAATGGGCTACGACCCTGTTCATCCCGATACTTTGGCAGAAAATAGCTCATTATCAGCCAGCG
ACATTTATGCCTTGCTAACAGAATGGGAATTGGAAGGAATTGTGGCAAGTTTAGCAGGTGGACGCTATCAACGAATTAAA
TAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Neisseria meningitidis strain C311

59.801

100

0.602

  dprA Neisseria meningitidis MC58

59.801

100

0.602

  dprA Neisseria gonorrhoeae MS11

58.477

100

0.595

  dprA Neisseria gonorrhoeae strain FA1090

58.809

100

0.593

  dprA Glaesserella parasuis strain SC1401

37.817

98.5

0.372