Detailed information NTG0643182

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LOD78_RS05680
• Genome accession: NZ_CP090522
• Coordinates: 1120139..1120981 (-)
• Length: 280 a.a.
• NCBI ID: WP_274505062.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain SS17
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1115139..1125981

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LOD78_RS05665 (LOD78_05660)	rplL	1116646..1117008 (-)	363	WP_174846023.1	50S ribosomal protein L7/L12	-
LOD78_RS05670 (LOD78_05665)	rplJ	1117076..1117573 (-)	498	WP_172037125.1	50S ribosomal protein L10	-
LOD78_RS05675 (LOD78_05670)	topA	1117953..1120046 (-)	2094	WP_274505061.1	type I DNA topoisomerase	-
LOD78_RS05680 (LOD78_05675)	dprA	1120139..1120981 (-)	843	WP_274505062.1	DNA-processing protein DprA	Machinery gene
LOD78_RS05685 (LOD78_05680)	-	1121040..1121597 (-)	558	WP_172016613.1	sugar O-acetyltransferase	-
LOD78_RS05690 (LOD78_05685)	-	1121608..1121868 (-)	261	WP_171989405.1	metal-sensitive transcriptional regulator	-
LOD78_RS05695 (LOD78_05690)	-	1121989..1122324 (+)	336	WP_171989404.1	rhodanese-like domain-containing protein	-
LOD78_RS05700 (LOD78_05695)	-	1122321..1123976 (+)	1656	WP_274505063.1	FAD-dependent oxidoreductase	-
LOD78_RS05705 (LOD78_05700)	-	1124085..1124636 (+)	552	WP_172037128.1	DUF1836 domain-containing protein	-
LOD78_RS05710 (LOD78_05705)	-	1124626..1125276 (+)	651	WP_171989401.1	hemolysin III family protein	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31356.11 Da
• Isoelectric Point: 8.2219

>NTDB_id=643182 LOD78_RS05680 WP_274505062.1 1120139..1120981(-) (dprA) [Streptococcus parasuis strain SS17]
MNNFELFKWKKAGLSNLNINKVLAYQEKQGKKLTLRNVAVVSECKNPILFMENYKNLDTKACREEFNKYPSFSILDDIYP
TALKQIYNPPVLLFYQGDLELLEKSKLAVVGTRNASENGIHSVQKIIKELNNRFVIVSGMARGIDTVAHIASLKNGGQTI
AVIGTGLDNVYPKENKELQHYIGKHQLVLTEYEPNAQPLKYHFPERNRIIAGLAEGLVVCEAKIRSGSLITCERALEEGR
EVYAIPGSIVDGKSDGCHHLIQEGAKCITSGLDILSDYRF

Nucleotide

• Length: 843 bp

>NTDB_id=643182 LOD78_RS05680 WP_274505062.1 1120139..1120981(-) (dprA) [Streptococcus parasuis strain SS17]
ATGAATAATTTTGAATTGTTTAAATGGAAAAAAGCAGGCTTGTCCAATCTTAATATTAATAAAGTTTTGGCCTATCAAGA
AAAACAAGGTAAAAAATTAACTTTACGGAATGTCGCTGTAGTATCTGAATGTAAAAATCCAATTCTTTTCATGGAAAATT
ATAAGAATTTAGATACTAAGGCTTGCCGGGAGGAATTTAATAAGTATCCATCTTTTTCAATTTTGGATGATATTTATCCC
ACAGCTTTAAAACAAATTTATAATCCACCAGTTCTCTTATTTTATCAAGGTGATCTTGAATTACTTGAAAAATCAAAATT
GGCAGTGGTAGGTACACGCAATGCCAGTGAAAATGGCATTCATTCTGTTCAAAAAATTATCAAAGAACTCAATAATCGCT
TTGTCATTGTGAGTGGTATGGCCAGGGGGATTGATACGGTAGCTCATATTGCGAGTTTGAAAAATGGCGGACAAACCATT
GCAGTGATTGGAACAGGATTAGATAATGTATATCCTAAGGAAAACAAGGAGTTACAACACTATATTGGAAAACATCAATT
AGTGCTAACAGAGTATGAACCAAATGCCCAGCCTTTAAAATACCATTTCCCCGAACGAAACCGCATTATTGCCGGATTGG
CTGAAGGTCTGGTGGTCTGTGAGGCAAAAATACGGTCTGGTAGCTTGATTACTTGCGAACGTGCCTTGGAAGAAGGAAGA
GAAGTTTATGCCATTCCTGGTTCTATTGTGGATGGAAAATCAGATGGCTGTCATCATTTGATACAGGAAGGGGCAAAGTG
CATTACATCAGGCTTGGACATCCTTTCAGACTATCGATTTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-61)

• DNA recombination-mediator protein A (DNA_processg_A) (73-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	68.571	100	0.686
dprA/cilB/dalA	Streptococcus mitis SK321	61.429	100	0.614
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	61.429	100	0.614
dprA/cilB/dalA	Streptococcus pneumoniae D39	61.429	100	0.614
dprA/cilB/dalA	Streptococcus pneumoniae R6	61.429	100	0.614
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	61.429	100	0.614
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	60.714	100	0.607
dprA	Lactococcus lactis subsp. cremoris KW2	58.571	100	0.586
dprA	Vibrio campbellii strain DS40M4	35.154	100	0.368
dprA	Legionella pneumophila strain ERS1305867	40.891	88.214	0.361