Detailed information NTG0640171

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: ODS73_RS10700
• Genome accession: NZ_CP107038
• Coordinates: 2041643..2042047 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588005.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain BM6001
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2036643..2047047

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ODS73_RS10660 (ODS73_10650)	rnpA	2037057..2037428 (-)	372	WP_000739246.1	ribonuclease P protein component	-
ODS73_RS10665 (ODS73_10655)	-	2037445..2037576 (-)	132	WP_000768904.1	hypothetical protein	-
ODS73_RS10670 (ODS73_10660)	-	2037577..2038767 (-)	1191	WP_284060558.1	acetate kinase	-
ODS73_RS10675 (ODS73_10665)	comGH	2038818..2039771 (-)	954	WP_221015135.1	class I SAM-dependent methyltransferase	Machinery gene
ODS73_RS10680 (ODS73_10670)	-	2039832..2040426 (-)	595	Protein_2091	class I SAM-dependent methyltransferase	-
ODS73_RS10685 (ODS73_10675)	comGG/cglG	2040563..2040976 (-)	414	WP_284060559.1	competence type IV pilus minor pilin ComGG	Machinery gene
ODS73_RS10690 (ODS73_10680)	comGF/cglF	2040954..2041415 (-)	462	WP_000250523.1	competence type IV pilus minor pilin ComGF	Machinery gene
ODS73_RS10695 (ODS73_10685)	comGE/cglE	2041378..2041680 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
ODS73_RS10700 (ODS73_10690)	comGD/cglD	2041643..2042047 (-)	405	WP_000588005.1	competence type IV pilus minor pilin ComGD	Machinery gene
ODS73_RS10705 (ODS73_10695)	comGC/cglC	2042040..2042306 (-)	267	WP_000962026.1	competence type IV pilus major pilin ComGC	Machinery gene
ODS73_RS10710 (ODS73_10700)	-	2042308..2042565 (-)	258	WP_050266402.1	hypothetical protein	-
ODS73_RS10715 (ODS73_10705)	-	2042795..2043751 (-)	957	WP_284060560.1	N-acetylmuramoyl-L-alanine amidase family protein	-
ODS73_RS10720 (ODS73_10710)	-	2043755..2044087 (-)	333	WP_284060561.1	phage holin	-
ODS73_RS10725 (ODS73_10715)	-	2044091..2044507 (-)	417	WP_000687454.1	phage holin family protein	-
ODS73_RS10730 (ODS73_10720)	-	2044517..2044780 (-)	264	WP_050266966.1	hypothetical protein	-
ODS73_RS10735 (ODS73_10725)	-	2044840..2046888 (-)	2049	WP_284060562.1	DUF859 family phage minor structural protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14636.81 Da
• Isoelectric Point: 10.2164

>NTDB_id=640171 ODS73_RS10700 WP_000588005.1 2041643..2042047(-) (comGD/cglD) [Streptococcus pneumoniae strain BM6001]
MIKAFTMLESLLALSLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTISNGSQKLPV
PKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=640171 ODS73_RS10700 WP_000588005.1 2041643..2042047(-) (comGD/cglD) [Streptococcus pneumoniae strain BM6001]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGCTTTGAGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCAGTAGAGGAACAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGATTAGCAATGGCAGTCAAAAGTTGCCAGTT
CCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae Rx1	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae D39	96.269	100	0.963
comGD/cglD	Streptococcus pneumoniae R6	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.241	99.254	0.955
comGD/cglD	Streptococcus mitis SK321	95.522	100	0.955
comGD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comGD	Streptococcus mutans UA140	50	95.522	0.478
comGD	Streptococcus mutans UA159	50	95.522	0.478