Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Regulator |
| Locus tag | N596_RS06865 | Genome accession | NC_022584 |
| Coordinates | 1482475..1483836 (-) | Length | 453 a.a. |
| NCBI ID | WP_023027410.1 | Uniprot ID | - |
| Organism | Streptococcus ilei | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1477475..1488836
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N596_RS06850 (N596_07035) | - | 1478241..1478906 (+) | 666 | WP_258025864.1 | DUF4947 domain-containing protein | - |
| N596_RS06855 (N596_07040) | - | 1478971..1481766 (-) | 2796 | WP_042361293.1 | YhgE/Pip domain-containing protein | - |
| N596_RS06860 (N596_07045) | - | 1481902..1482438 (+) | 537 | WP_023027409.1 | TetR/AcrR family transcriptional regulator | - |
| N596_RS06865 (N596_07050) | comB | 1482475..1483836 (-) | 1362 | WP_023027410.1 | bacteriocin secretion accessory protein | Regulator |
| N596_RS06870 (N596_07055) | comA | 1483863..1486016 (-) | 2154 | WP_023027411.1 | peptide cleavage/export ABC transporter ComA | Regulator |
| N596_RS06875 (N596_07060) | rpsD | 1486301..1486912 (-) | 612 | WP_003009175.1 | 30S ribosomal protein S4 | - |
| N596_RS06880 (N596_07065) | - | 1487486..1487758 (-) | 273 | WP_023027413.1 | Veg family protein | - |
Sequence
Protein
Download Length: 453 a.a. Molecular weight: 50783.28 Da Isoelectric Point: 6.3549
>NTDB_id=62962 N596_RS06865 WP_023027410.1 1482475..1483836(-) (comB) [Streptococcus ilei]
MMNEKYFESAEFYQKRFHNFASLWVVPCFLLLLFVVGFSVFAKKEVTLSSRGTIEATRVIDQIQSTSNSPIQVNHLKENK
EIKKGEILVEYQEDQEKQQGMSLTQQLDLLKKQEEQLKLLKTSIETGESQFTGNEHFGYDQLFKDYQQQIAILQAQAHQQ
NATIASQNASASSSQAEIGQVIQDQEKRLADYHSLKSALLEGRSLDATHPLYSFYQSYAQQAHGEENAQAQASFIGQLDS
QIQQLEASISNYRIQYAGSGSQQAYSTSLDSQIASLKAQQLSKVGQDLLLLSQQIADLESKVKTQETLLQKTRILAKDEG
VLHLNDETKGASIVAEGTPLAQVYPLIQKEKEVKIVTYIPSKDIATIHVGDRIRFSTQGSKQKPITLEVRISSIASSATR
TEQGNFFKIEGVLRLKDHEAKLLRYGLEGKCVLITGEKSYFSFFVDQFLGAGN
MMNEKYFESAEFYQKRFHNFASLWVVPCFLLLLFVVGFSVFAKKEVTLSSRGTIEATRVIDQIQSTSNSPIQVNHLKENK
EIKKGEILVEYQEDQEKQQGMSLTQQLDLLKKQEEQLKLLKTSIETGESQFTGNEHFGYDQLFKDYQQQIAILQAQAHQQ
NATIASQNASASSSQAEIGQVIQDQEKRLADYHSLKSALLEGRSLDATHPLYSFYQSYAQQAHGEENAQAQASFIGQLDS
QIQQLEASISNYRIQYAGSGSQQAYSTSLDSQIASLKAQQLSKVGQDLLLLSQQIADLESKVKTQETLLQKTRILAKDEG
VLHLNDETKGASIVAEGTPLAQVYPLIQKEKEVKIVTYIPSKDIATIHVGDRIRFSTQGSKQKPITLEVRISSIASSATR
TEQGNFFKIEGVLRLKDHEAKLLRYGLEGKCVLITGEKSYFSFFVDQFLGAGN
Nucleotide
Download Length: 1362 bp
>NTDB_id=62962 N596_RS06865 WP_023027410.1 1482475..1483836(-) (comB) [Streptococcus ilei]
ATGATGAACGAAAAATATTTTGAAAGTGCAGAATTCTATCAGAAACGTTTCCATAATTTTGCTAGTTTATGGGTAGTCCC
TTGTTTTCTTTTACTACTTTTTGTTGTGGGATTCTCTGTCTTTGCCAAGAAGGAAGTGACCTTGTCTAGTCGAGGGACAA
TTGAAGCTACGCGCGTGATTGATCAAATCCAATCAACCAGTAATTCTCCCATTCAAGTCAACCATCTAAAGGAAAATAAA
GAGATTAAGAAGGGAGAAATCTTGGTAGAATACCAAGAGGACCAGGAAAAACAACAAGGAATGAGCTTAACGCAACAGCT
AGACCTCTTAAAGAAACAGGAGGAACAATTAAAATTGTTGAAAACGAGCATTGAGACAGGGGAGAGCCAGTTTACAGGAA
ATGAGCATTTTGGTTATGACCAGCTGTTTAAGGATTACCAGCAACAGATAGCGATTCTCCAAGCTCAAGCCCATCAACAA
AATGCAACCATTGCTTCTCAAAATGCCAGTGCAAGTTCCAGTCAAGCAGAAATTGGCCAAGTTATCCAAGACCAAGAGAA
GCGCTTAGCTGATTACCATAGTCTAAAATCAGCTCTACTAGAGGGGAGAAGTCTGGATGCGACTCATCCACTTTACTCTT
TCTACCAGAGTTACGCTCAGCAAGCACACGGAGAGGAAAATGCTCAAGCACAAGCTTCTTTTATTGGCCAGCTGGATAGT
CAAATCCAGCAGTTAGAGGCAAGTATTTCTAATTATCGCATCCAATATGCGGGATCCGGAAGCCAACAAGCTTATTCGAC
CAGTTTAGATAGTCAAATAGCCTCCCTGAAAGCTCAACAACTGAGTAAGGTCGGACAAGATCTTCTGCTTCTTTCTCAGC
AAATCGCAGATCTAGAAAGTAAGGTAAAAACACAAGAAACTCTTCTTCAGAAGACTCGGATTCTAGCGAAGGATGAAGGG
GTGCTTCATTTGAATGATGAAACAAAAGGAGCGAGTATTGTAGCGGAAGGGACTCCTCTGGCTCAAGTTTATCCTCTCAT
TCAGAAAGAAAAAGAAGTCAAGATTGTCACCTATATTCCTTCAAAAGATATAGCCACGATTCATGTGGGAGATCGGATTC
GCTTTAGCACGCAGGGAAGTAAACAAAAACCAATTACGCTAGAAGTCCGTATTAGCTCAATAGCTTCGAGTGCAACTCGG
ACAGAACAAGGCAACTTTTTCAAAATAGAGGGAGTTCTTCGTCTTAAGGATCATGAGGCCAAGCTCCTACGGTACGGTTT
GGAAGGGAAGTGTGTCTTGATTACAGGAGAAAAATCCTACTTCAGTTTCTTTGTGGATCAATTTTTAGGAGCGGGGAACT
AA
ATGATGAACGAAAAATATTTTGAAAGTGCAGAATTCTATCAGAAACGTTTCCATAATTTTGCTAGTTTATGGGTAGTCCC
TTGTTTTCTTTTACTACTTTTTGTTGTGGGATTCTCTGTCTTTGCCAAGAAGGAAGTGACCTTGTCTAGTCGAGGGACAA
TTGAAGCTACGCGCGTGATTGATCAAATCCAATCAACCAGTAATTCTCCCATTCAAGTCAACCATCTAAAGGAAAATAAA
GAGATTAAGAAGGGAGAAATCTTGGTAGAATACCAAGAGGACCAGGAAAAACAACAAGGAATGAGCTTAACGCAACAGCT
AGACCTCTTAAAGAAACAGGAGGAACAATTAAAATTGTTGAAAACGAGCATTGAGACAGGGGAGAGCCAGTTTACAGGAA
ATGAGCATTTTGGTTATGACCAGCTGTTTAAGGATTACCAGCAACAGATAGCGATTCTCCAAGCTCAAGCCCATCAACAA
AATGCAACCATTGCTTCTCAAAATGCCAGTGCAAGTTCCAGTCAAGCAGAAATTGGCCAAGTTATCCAAGACCAAGAGAA
GCGCTTAGCTGATTACCATAGTCTAAAATCAGCTCTACTAGAGGGGAGAAGTCTGGATGCGACTCATCCACTTTACTCTT
TCTACCAGAGTTACGCTCAGCAAGCACACGGAGAGGAAAATGCTCAAGCACAAGCTTCTTTTATTGGCCAGCTGGATAGT
CAAATCCAGCAGTTAGAGGCAAGTATTTCTAATTATCGCATCCAATATGCGGGATCCGGAAGCCAACAAGCTTATTCGAC
CAGTTTAGATAGTCAAATAGCCTCCCTGAAAGCTCAACAACTGAGTAAGGTCGGACAAGATCTTCTGCTTCTTTCTCAGC
AAATCGCAGATCTAGAAAGTAAGGTAAAAACACAAGAAACTCTTCTTCAGAAGACTCGGATTCTAGCGAAGGATGAAGGG
GTGCTTCATTTGAATGATGAAACAAAAGGAGCGAGTATTGTAGCGGAAGGGACTCCTCTGGCTCAAGTTTATCCTCTCAT
TCAGAAAGAAAAAGAAGTCAAGATTGTCACCTATATTCCTTCAAAAGATATAGCCACGATTCATGTGGGAGATCGGATTC
GCTTTAGCACGCAGGGAAGTAAACAAAAACCAATTACGCTAGAAGTCCGTATTAGCTCAATAGCTTCGAGTGCAACTCGG
ACAGAACAAGGCAACTTTTTCAAAATAGAGGGAGTTCTTCGTCTTAAGGATCATGAGGCCAAGCTCCTACGGTACGGTTT
GGAAGGGAAGTGTGTCTTGATTACAGGAGAAAAATCCTACTTCAGTTTCTTTGTGGATCAATTTTTAGGAGCGGGGAACT
AA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Streptococcus gordonii str. Challis substr. CH1 |
54.425 |
99.779 |
0.543 |
| comB | Streptococcus mitis SK321 |
50.223 |
98.896 |
0.497 |
| comB | Streptococcus pneumoniae Rx1 |
50.223 |
98.896 |
0.497 |
| comB | Streptococcus pneumoniae R6 |
50.223 |
98.896 |
0.497 |
| comB | Streptococcus pneumoniae D39 |
50.223 |
98.896 |
0.497 |
| comB | Streptococcus mitis NCTC 12261 |
50.223 |
98.896 |
0.497 |
| comB | Streptococcus pneumoniae TIGR4 |
49.554 |
98.896 |
0.49 |