Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Regulator |
| Locus tag | N597_RS08710 | Genome accession | NC_022582 |
| Coordinates | 1845746..1847107 (-) | Length | 453 a.a. |
| NCBI ID | WP_052329298.1 | Uniprot ID | - |
| Organism | Streptococcus ilei | ||
| Function | transport of ComC (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1840746..1852107
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N597_RS08695 (N597_08945) | - | 1841512..1842177 (+) | 666 | WP_023024751.1 | DUF4947 domain-containing protein | - |
| N597_RS08700 (N597_08950) | - | 1842242..1845037 (-) | 2796 | WP_023024753.1 | YhgE/Pip domain-containing protein | - |
| N597_RS08705 (N597_08955) | - | 1845173..1845709 (+) | 537 | WP_023024755.1 | TetR/AcrR family transcriptional regulator | - |
| N597_RS08710 (N597_08960) | comB | 1845746..1847107 (-) | 1362 | WP_052329298.1 | bacteriocin secretion accessory protein | Regulator |
| N597_RS08715 (N597_08965) | comA | 1847134..1849287 (-) | 2154 | WP_023024761.1 | peptide cleavage/export ABC transporter ComA | Regulator |
| N597_RS08720 (N597_08970) | rpsD | 1849571..1850182 (-) | 612 | WP_003009175.1 | 30S ribosomal protein S4 | - |
| N597_RS08725 (N597_08975) | - | 1850756..1851028 (-) | 273 | WP_006595358.1 | Veg family protein | - |
Sequence
Protein
Download Length: 453 a.a. Molecular weight: 50764.36 Da Isoelectric Point: 6.6683
>NTDB_id=62926 N597_RS08710 WP_052329298.1 1845746..1847107(-) (comB) [Streptococcus ilei]
MMNEKYFESAEFYQKRFHNFASLWVVPCFLLLLFVVGFSVFAKKEVTLSSRGTIEATRVIDQIQSTSNSPIQINHLKENK
EIKKGEILVEYQEDQEKQQGMSLTQQLDLLKKQEEQLKLLKISIETGESQFKGNEHFGYDQLFKDYQQQIAILQAQAHQQ
NATIASQNASASSSQAEIGQVIQDQEKRLADYHSLKSALLEGRSLDVTHPLYSFYQSYAQQAHGEENAQAQASFIGQLDS
QIQQLEASISNYRIQYAGSGSQQAYSTSLDSQIASLKAQQLSKVGQDLLLLSQQIADLDSKVKTQETLLQKTRILAKGEG
VLHLNDETKGASIVAEGTPLAQVYPLIQKEKEVKIVTYIPSKDIATIHVGDRIRFSTQGSKQKPITLEARISSIASSATR
TEQGNFFKIEGVLRLKDHEAKLLRYGLEGKCVLITGEKSYFSFFVDQFLGAGN
MMNEKYFESAEFYQKRFHNFASLWVVPCFLLLLFVVGFSVFAKKEVTLSSRGTIEATRVIDQIQSTSNSPIQINHLKENK
EIKKGEILVEYQEDQEKQQGMSLTQQLDLLKKQEEQLKLLKISIETGESQFKGNEHFGYDQLFKDYQQQIAILQAQAHQQ
NATIASQNASASSSQAEIGQVIQDQEKRLADYHSLKSALLEGRSLDVTHPLYSFYQSYAQQAHGEENAQAQASFIGQLDS
QIQQLEASISNYRIQYAGSGSQQAYSTSLDSQIASLKAQQLSKVGQDLLLLSQQIADLDSKVKTQETLLQKTRILAKGEG
VLHLNDETKGASIVAEGTPLAQVYPLIQKEKEVKIVTYIPSKDIATIHVGDRIRFSTQGSKQKPITLEARISSIASSATR
TEQGNFFKIEGVLRLKDHEAKLLRYGLEGKCVLITGEKSYFSFFVDQFLGAGN
Nucleotide
Download Length: 1362 bp
>NTDB_id=62926 N597_RS08710 WP_052329298.1 1845746..1847107(-) (comB) [Streptococcus ilei]
ATGATGAACGAAAAATATTTTGAAAGTGCAGAATTCTATCAGAAACGTTTCCATAATTTTGCTAGTTTATGGGTAGTCCC
TTGTTTTCTTTTACTACTTTTTGTTGTGGGATTCTCTGTCTTTGCCAAGAAGGAAGTGACCTTGTCTAGTCGAGGGACAA
TTGAAGCTACGCGCGTAATTGATCAAATCCAATCAACCAGTAATTCTCCCATTCAAATCAACCATCTAAAGGAAAATAAA
GAGATTAAGAAGGGAGAAATCTTGGTAGAGTACCAAGAGGACCAGGAAAAACAACAAGGAATGAGCTTAACGCAACAGCT
AGACCTCTTAAAGAAACAGGAGGAGCAATTAAAATTGTTGAAAATTAGCATTGAGACAGGGGAGAGCCAGTTTAAAGGAA
ATGAGCATTTTGGTTATGACCAGCTGTTTAAGGATTACCAGCAACAGATAGCGATTCTCCAAGCTCAAGCCCATCAACAA
AATGCAACCATTGCTTCTCAAAATGCCAGTGCAAGTTCCAGTCAAGCAGAAATTGGCCAAGTTATCCAAGACCAAGAGAA
GCGCTTAGCTGATTACCATAGTCTAAAATCAGCTCTACTAGAGGGGAGAAGTCTGGATGTGACTCATCCACTTTACTCTT
TCTACCAGAGTTACGCTCAGCAAGCACACGGAGAGGAAAACGCTCAAGCACAAGCTTCTTTTATTGGCCAGCTGGATAGT
CAAATCCAGCAGTTAGAGGCGAGTATTTCTAATTATCGAATCCAATATGCGGGATCCGGAAGCCAACAAGCTTATTCGAC
CAGTTTAGATAGTCAAATAGCCTCCCTGAAAGCTCAACAACTGAGTAAGGTCGGACAAGATCTTCTGCTTCTTTCTCAGC
AAATCGCAGATCTAGACAGTAAGGTAAAAACACAAGAAACTCTTCTTCAGAAGACTCGGATTCTAGCGAAGGGTGAAGGG
GTGCTCCATTTGAATGATGAAACAAAAGGAGCGAGCATTGTAGCGGAAGGCACTCCTCTGGCTCAAGTTTATCCTCTCAT
TCAGAAAGAAAAAGAAGTCAAGATTGTCACCTATATTCCTTCAAAAGATATAGCTACGATTCATGTGGGAGATCGGATTC
GCTTTAGCACACAGGGTAGTAAACAAAAACCGATTACGCTAGAGGCTCGTATTAGCTCTATTGCTTCGAGTGCAACTCGG
ACAGAACAAGGCAACTTTTTCAAAATAGAGGGAGTTCTTCGTCTTAAGGATCATGAGGCCAAGCTCCTACGGTACGGTTT
GGAAGGGAAGTGTGTCTTGATTACAGGAGAAAAATCTTACTTCAGTTTCTTTGTGGATCAATTTTTAGGAGCGGGGAACT
AA
ATGATGAACGAAAAATATTTTGAAAGTGCAGAATTCTATCAGAAACGTTTCCATAATTTTGCTAGTTTATGGGTAGTCCC
TTGTTTTCTTTTACTACTTTTTGTTGTGGGATTCTCTGTCTTTGCCAAGAAGGAAGTGACCTTGTCTAGTCGAGGGACAA
TTGAAGCTACGCGCGTAATTGATCAAATCCAATCAACCAGTAATTCTCCCATTCAAATCAACCATCTAAAGGAAAATAAA
GAGATTAAGAAGGGAGAAATCTTGGTAGAGTACCAAGAGGACCAGGAAAAACAACAAGGAATGAGCTTAACGCAACAGCT
AGACCTCTTAAAGAAACAGGAGGAGCAATTAAAATTGTTGAAAATTAGCATTGAGACAGGGGAGAGCCAGTTTAAAGGAA
ATGAGCATTTTGGTTATGACCAGCTGTTTAAGGATTACCAGCAACAGATAGCGATTCTCCAAGCTCAAGCCCATCAACAA
AATGCAACCATTGCTTCTCAAAATGCCAGTGCAAGTTCCAGTCAAGCAGAAATTGGCCAAGTTATCCAAGACCAAGAGAA
GCGCTTAGCTGATTACCATAGTCTAAAATCAGCTCTACTAGAGGGGAGAAGTCTGGATGTGACTCATCCACTTTACTCTT
TCTACCAGAGTTACGCTCAGCAAGCACACGGAGAGGAAAACGCTCAAGCACAAGCTTCTTTTATTGGCCAGCTGGATAGT
CAAATCCAGCAGTTAGAGGCGAGTATTTCTAATTATCGAATCCAATATGCGGGATCCGGAAGCCAACAAGCTTATTCGAC
CAGTTTAGATAGTCAAATAGCCTCCCTGAAAGCTCAACAACTGAGTAAGGTCGGACAAGATCTTCTGCTTCTTTCTCAGC
AAATCGCAGATCTAGACAGTAAGGTAAAAACACAAGAAACTCTTCTTCAGAAGACTCGGATTCTAGCGAAGGGTGAAGGG
GTGCTCCATTTGAATGATGAAACAAAAGGAGCGAGCATTGTAGCGGAAGGCACTCCTCTGGCTCAAGTTTATCCTCTCAT
TCAGAAAGAAAAAGAAGTCAAGATTGTCACCTATATTCCTTCAAAAGATATAGCTACGATTCATGTGGGAGATCGGATTC
GCTTTAGCACACAGGGTAGTAAACAAAAACCGATTACGCTAGAGGCTCGTATTAGCTCTATTGCTTCGAGTGCAACTCGG
ACAGAACAAGGCAACTTTTTCAAAATAGAGGGAGTTCTTCGTCTTAAGGATCATGAGGCCAAGCTCCTACGGTACGGTTT
GGAAGGGAAGTGTGTCTTGATTACAGGAGAAAAATCTTACTTCAGTTTCTTTGTGGATCAATTTTTAGGAGCGGGGAACT
AA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Streptococcus gordonii str. Challis substr. CH1 |
53.761 |
99.779 |
0.536 |
| comB | Streptococcus pneumoniae Rx1 |
49.777 |
98.896 |
0.492 |
| comB | Streptococcus pneumoniae D39 |
49.777 |
98.896 |
0.492 |
| comB | Streptococcus mitis SK321 |
49.777 |
98.896 |
0.492 |
| comB | Streptococcus pneumoniae R6 |
49.777 |
98.896 |
0.492 |
| comB | Streptococcus mitis NCTC 12261 |
49.777 |
98.896 |
0.492 |
| comB | Streptococcus pneumoniae TIGR4 |
49.107 |
98.896 |
0.486 |