Detailed information NTG0062910

Bioinformatically predicted

Overview

• Name: dprA/cilB/dalA
• Type: Machinery gene
• Locus tag: N597_RS03960
• Genome accession: NC_022582
• Coordinates: 786336..787178 (+)
• Length: 280 a.a.
• NCBI ID: WP_023023203.1
• Uniprot ID: -
• Organism: Streptococcus ilei
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 781336..792178

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N597_RS03935 (N597_04065)	dapA	782241..783176 (+)	936	WP_023023195.1	4-hydroxy-tetrahydrodipicolinate synthase	-
N597_RS03940 (N597_04070)	-	783248..783586 (+)	339	WP_006597242.1	ATP cone domain-containing protein	-
N597_RS03945 (N597_04075)	ylqF	783712..784563 (+)	852	WP_023023197.1	ribosome biogenesis GTPase YlqF	-
N597_RS03950 (N597_04080)	-	784550..785320 (+)	771	WP_023023199.1	ribonuclease HII	-
N597_RS03955 (N597_04085)	-	785333..786259 (+)	927	WP_023023201.1	ROK family protein	-
N597_RS03960 (N597_04090)	dprA/cilB/dalA	786336..787178 (+)	843	WP_023023203.1	DNA-processing protein DprA	Machinery gene
N597_RS03965 (N597_04095)	topA	787271..789358 (+)	2088	WP_023023206.1	type I DNA topoisomerase	-
N597_RS03970 (N597_04100)	-	789466..790143 (+)	678	WP_023023209.1	SatD family protein	-
N597_RS03975 (N597_04105)	-	790127..790831 (+)	705	WP_023023211.1	DUF3307 domain-containing protein	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31378.06 Da
• Isoelectric Point: 6.6067

>NTDB_id=62910 N597_RS03960 WP_023023203.1 786336..787178(+) (dprA/cilB/dalA) [Streptococcus ilei]
MNKYELYKLKVAGLSNLQVFSIVNYWEMNGEWPSLELMAKIAGCRNQTLFMERYIRIDDKVLREEFKEFDSISIMDPEYP
EELLWMHNPPVLLFYSGNIDLLKQPKIAVVGSRSCSRNGIQSVEKIINELNNELIVVSGLAKGIDAAAHYAAIRNGGKTI
GVIGTGLDVFYPRSNKQLQKYMSGSHLVLTEYGPGQGPQKHHFPERNRIIAGLSRAVIVAEARMRSGSLITCERAMEEGR
DVFAIPGSILDGRSDGCHHLIQEGAKLVTSGKDVLDEFEF

Nucleotide

• Length: 843 bp

>NTDB_id=62910 N597_RS03960 WP_023023203.1 786336..787178(+) (dprA/cilB/dalA) [Streptococcus ilei]
ATGAACAAATATGAACTTTATAAATTAAAGGTTGCTGGCCTGTCTAATCTACAGGTTTTTAGCATTGTCAATTACTGGGA
AATGAATGGGGAATGGCCTTCTTTAGAATTAATGGCAAAAATTGCAGGTTGTCGTAATCAAACACTATTTATGGAACGGT
ATATCCGGATTGATGACAAGGTCTTGAGAGAAGAGTTTAAGGAGTTTGATTCGATTTCCATTATGGATCCGGAATATCCT
GAAGAGCTTCTCTGGATGCATAACCCACCTGTTTTGTTGTTTTACTCAGGCAATATTGATCTTCTTAAACAGCCAAAGAT
TGCGGTCGTAGGAAGTCGATCCTGTAGTCGTAACGGGATTCAATCCGTCGAGAAAATCATTAACGAGTTAAATAATGAAT
TGATTGTGGTGAGCGGATTAGCCAAGGGAATTGATGCTGCAGCCCATTATGCCGCTATTCGAAATGGAGGAAAGACAATT
GGAGTGATTGGTACTGGCTTAGATGTCTTCTATCCTAGATCCAATAAACAATTGCAGAAGTACATGAGTGGGAGTCATTT
AGTGTTAACAGAATACGGTCCTGGACAAGGCCCTCAAAAACATCATTTTCCAGAACGCAATCGGATTATTGCTGGGCTTT
CTAGAGCAGTGATTGTGGCGGAAGCGCGGATGCGATCTGGAAGTCTGATCACCTGCGAGCGTGCTATGGAAGAAGGGCGA
GATGTCTTTGCTATTCCTGGTTCGATCTTGGATGGACGTTCAGATGGCTGTCACCACCTCATTCAAGAAGGTGCAAAGCT
GGTCACCAGTGGAAAAGATGTCCTAGATGAGTTTGAATTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (69-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-62)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA/cilB/dalA	Streptococcus mitis SK321	68.571	100	0.686
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	67.857	100	0.679
dprA/cilB/dalA	Streptococcus pneumoniae D39	67.5	100	0.675
dprA/cilB/dalA	Streptococcus pneumoniae R6	67.5	100	0.675
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	67.5	100	0.675
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	67.5	100	0.675
dprA	Streptococcus mutans UA159	58.214	100	0.582
dprA	Lactococcus lactis subsp. cremoris KW2	54.286	100	0.543
dprA	Bacillus subtilis subsp. subtilis str. 168	38.182	98.214	0.375
dprA	Legionella pneumophila strain ERS1305867	39.098	95	0.371