Detailed information NTG0062888

Bioinformatically predicted

Overview

• Name: amiC
• Type: Regulator
• Locus tag: N597_RS01090
• Genome accession: NC_022582
• Coordinates: 230237..231736 (+)
• Length: 499 a.a.
• NCBI ID: WP_023022220.1
• Uniprot ID: -
• Organism: Streptococcus ilei
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 225237..236736

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N597_RS01080 (N597_01115)	amiA3	226042..228006 (+)	1965	WP_023022215.1	peptide ABC transporter substrate-binding protein	Regulator
N597_RS01085 (N597_01120)	amiA3	228187..230172 (+)	1986	WP_023022217.1	peptide ABC transporter substrate-binding protein	Regulator
N597_RS01090 (N597_01125)	amiC	230237..231736 (+)	1500	WP_023022220.1	ABC transporter permease	Regulator
N597_RS01095 (N597_01130)	amiD	231736..232662 (+)	927	WP_023022222.1	oligopeptide ABC transporter permease OppC	Regulator
N597_RS01100 (N597_01135)	amiE	232674..233741 (+)	1068	WP_023022224.1	ABC transporter ATP-binding protein	Regulator
N597_RS01105 (N597_01140)	amiF	233751..234674 (+)	924	WP_023022226.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 499 a.a.
• Molecular weight: 55662.93 Da
• Isoelectric Point: 10.0795

>NTDB_id=62888 N597_RS01090 WP_023022220.1 230237..231736(+) (amiC) [Streptococcus ilei]
MKKYIFMRILRSLVSIFLVTTLTYTIIYTLTPRNLIFKNDPNYNKIAKTKDSKINYENTVYDRMGYIEYLDSKALKEKAS
KEDSSVTVEPTKENEKIYKKYISNLGNGWVLKRFPENKGFYATREVPVFERVIGFYGNLIQIDHPNVIKDASNPKLERYI
RIENDPAIGWSVVGSGTKHKYLLYFNGQFPFIHQNFVSLNLGESYPTYSNTPVLQVITQGQGTTKKSEVNFPTGKKESSI
NIYSRTYKSPSKADAQDIARFGKGDAYTATLSNYENPSMIVSSAIIGLIGIAIAYLIAIPLGSYMALLKNTWFDSASTAT
LTFMMSLPTIALVYIVRLAGSSIGLPDSFPVLGAQDWRSYVLPSVILGLLSAPGLAVWIRRYMIDLHSQDFVRFARAKGL
SEKEISRKHIFKNAMVPIVTGIPVQLVLVISGATLTETVFAFPGMGKMLIDSIKASNNTMVVGLVFIFTVLAVFGAMAGD
ILMVMVDPRIKLTTKKGGK

Nucleotide

• Length: 1500 bp

>NTDB_id=62888 N597_RS01090 WP_023022220.1 230237..231736(+) (amiC) [Streptococcus ilei]
ATGAAAAAATATATATTTATGCGTATTTTACGTTCGTTGGTGTCGATCTTTTTGGTTACGACATTGACGTATACAATTAT
TTATACGCTAACCCCAAGAAATTTAATTTTCAAAAACGACCCTAACTATAACAAGATTGCGAAAACAAAAGACTCTAAAA
TCAATTATGAAAATACAGTCTATGATCGCATGGGGTATATAGAATATCTTGATTCAAAAGCTTTGAAAGAAAAAGCAAGC
AAGGAAGACTCATCAGTAACAGTAGAGCCTACTAAAGAAAACGAGAAGATCTACAAAAAGTACATTTCTAACCTTGGAAA
TGGCTGGGTATTGAAACGTTTCCCTGAAAACAAAGGTTTTTACGCTACTCGTGAAGTCCCTGTCTTTGAACGTGTTATTG
GATTCTATGGTAATCTGATTCAGATTGACCATCCAAATGTCATCAAAGATGCTTCTAATCCAAAACTTGAACGCTATATT
CGAATTGAAAATGACCCAGCTATTGGTTGGTCAGTAGTTGGTTCGGGGACTAAACATAAATATCTTTTGTATTTCAATGG
TCAATTCCCGTTCATTCATCAAAATTTTGTATCCTTAAACTTGGGTGAATCTTACCCAACTTATTCAAATACACCTGTTC
TTCAGGTTATTACACAAGGACAAGGTACAACTAAGAAGAGTGAAGTAAACTTCCCAACAGGAAAAAAAGAATCTTCTATC
AATATCTACTCTCGTACATACAAATCACCAAGCAAGGCAGATGCTCAAGATATCGCCCGCTTTGGTAAAGGAGATGCTTA
TACAGCAACATTGAGCAACTATGAAAATCCATCCATGATTGTGAGCTCAGCCATTATCGGTTTAATCGGGATTGCGATTG
CCTACTTGATTGCTATTCCTTTAGGATCTTATATGGCCTTGTTGAAGAATACTTGGTTTGATAGTGCATCTACGGCAACT
TTAACATTTATGATGTCATTGCCGACGATTGCCTTGGTTTACATCGTTCGCTTGGCTGGCTCTTCTATCGGCTTACCAGA
TTCCTTCCCAGTGTTAGGGGCTCAGGATTGGCGCTCTTATGTACTACCTTCTGTGATTTTGGGTCTCTTGAGTGCACCAG
GATTGGCAGTTTGGATTCGCCGTTACATGATCGACTTGCATTCTCAAGACTTTGTCCGTTTTGCACGTGCCAAAGGGCTT
TCTGAGAAAGAAATTTCCCGCAAACATATCTTCAAAAACGCCATGGTTCCGATCGTTACAGGGATTCCTGTTCAATTGGT
TCTAGTCATTTCAGGGGCAACTTTGACAGAAACTGTCTTTGCCTTCCCTGGTATGGGTAAAATGTTGATTGATTCTATCA
AGGCATCCAATAATACCATGGTAGTTGGTCTTGTCTTCATCTTTACTGTTCTTGCTGTATTTGGAGCAATGGCTGGAGAT
ATCCTTATGGTTATGGTAGACCCTCGTATCAAACTAACAACTAAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (298-491)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiC	Streptococcus salivarius strain HSISS4	72.745	100	0.727
amiC	Streptococcus thermophilus LMD-9	72.345	100	0.723
amiC	Streptococcus thermophilus LMG 18311	72.345	100	0.723