Detailed information NTG0062891

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: N597_RS01105
• Genome accession: NC_022582
• Coordinates: 233751..234674 (+)
• Length: 307 a.a.
• NCBI ID: WP_023022226.1
• Uniprot ID: -
• Organism: Streptococcus ilei
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 228751..239674

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N597_RS01090 (N597_01125)	amiC	230237..231736 (+)	1500	WP_023022220.1	ABC transporter permease	Regulator
N597_RS01095 (N597_01130)	amiD	231736..232662 (+)	927	WP_023022222.1	oligopeptide ABC transporter permease OppC	Regulator
N597_RS01100 (N597_01135)	amiE	232674..233741 (+)	1068	WP_023022224.1	ABC transporter ATP-binding protein	Regulator
N597_RS01105 (N597_01140)	amiF	233751..234674 (+)	924	WP_023022226.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34879.00 Da
• Isoelectric Point: 6.1185

>NTDB_id=62891 N597_RS01105 WP_023022226.1 233751..234674(+) (amiF) [Streptococcus ilei]
MTEKLIEVKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSAGDILYDGKKINGKQNRK
DENELIRKIQMIFQDPAASLNERATVDYIISEGLYNYHLFENEEDRVRKVKEIMHEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMEPEFVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
NPIHPYTQSLLSAVPIPDPILERKKVLKVYDPDQHDYSTDKPEMVEIKPGHYVWANKAEQKKYKELV

Nucleotide

• Length: 924 bp

>NTDB_id=62891 N597_RS01105 WP_023022226.1 233751..234674(+) (amiF) [Streptococcus ilei]
ATGACAGAAAAATTAATAGAAGTTAAAGATCTAGAAATTTCCTTCGGTGAAGGAAGTAAAAAATTTGTAGCCGTAAAGAA
TGCAAATTTCTTCATCAATAAAGGGGAAACATTTTCCCTCGTTGGTGAGTCAGGTAGTGGGAAGACAACAATTGGTCGAG
CAATCATTGGTTTGAATGACACTAGTGCAGGTGACATCTTATATGATGGTAAAAAGATCAATGGGAAGCAAAATCGCAAG
GATGAAAATGAATTAATCCGAAAGATTCAAATGATCTTCCAAGACCCAGCAGCTAGCTTGAATGAGCGTGCAACAGTCGA
CTACATTATTTCAGAAGGTTTGTACAATTATCATCTATTCGAAAATGAAGAAGACCGAGTACGTAAAGTAAAAGAGATTA
TGCATGAAGTGGGTCTTCTAGCAGAACATTTGACTCGTTATCCCCATGAATTCTCTGGTGGACAACGCCAGCGGATTGGT
ATCGCTCGTGCCTTGGTAATGGAGCCAGAATTTGTTATTGCAGATGAACCAATTTCTGCCCTAGACGTATCAGTTCGTGC
ACAAGTATTGAACCTCCTGAAGAAATTCCAAAAAGAGTTGGGCTTGACTTATCTCTTTATAGCACACGATCTTTCAGTAG
TTCGTTTTATCTCTGATCGTATTGCGGTTATTTACAAAGGTGTTATTGTAGAAGTAGCTGAAACGGAAGAATTGTTTAAC
AACCCAATTCATCCTTATACACAATCTCTACTATCGGCAGTTCCGATTCCAGATCCAATTCTAGAACGCAAAAAAGTTCT
GAAAGTTTATGATCCTGATCAGCATGATTATTCAACCGACAAACCAGAAATGGTTGAAATCAAGCCAGGACATTACGTTT
GGGCAAATAAAGCAGAACAGAAAAAATATAAAGAACTTGTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus salivarius strain HSISS4	84.262	99.349	0.837
amiF	Streptococcus thermophilus LMG 18311	83.934	99.349	0.834
amiF	Streptococcus thermophilus LMD-9	83.607	99.349	0.831