Detailed information NTG0625741

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: NY025_RS25185
• Genome accession: NZ_CP103852
• Coordinates: 3705513..3706718 (+)
• Length: 401 a.a.
• NCBI ID: WP_193026807.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain LMG 9673
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 3700513..3711718

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NY025_RS25170 (NY025_25170)	-	3701537..3703507 (-)	1971	WP_197365572.1	glycosyltransferase family 39 protein	-
NY025_RS25175 (NY025_25175)	def	3703555..3704064 (-)	510	WP_020750043.1	peptide deformylase	-
NY025_RS25180 (NY025_25180)	-	3704318..3705490 (+)	1173	WP_193028570.1	LysM peptidoglycan-binding domain-containing protein	-
NY025_RS25185 (NY025_25185)	dprA	3705513..3706718 (+)	1206	WP_193026807.1	DNA-processing protein DprA	Machinery gene
NY025_RS25190 (NY025_25190)	-	3706759..3707148 (+)	390	WP_020750046.1	thioredoxin family protein	-
NY025_RS25195 (NY025_25195)	-	3707379..3710024 (+)	2646	WP_020750047.1	DNA topoisomerase III	-
NY025_RS25200 (NY025_25200)	-	3710125..3711063 (-)	939	WP_020750048.1	LysR family transcriptional regulator	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 41295.31 Da
• Isoelectric Point: 6.0525

>NTDB_id=625741 NY025_RS25185 WP_193026807.1 3705513..3706718(+) (dprA) [Ralstonia pseudosolanacearum strain LMG 9673]
MIDASQVAAPAATAPADSLDATRDPAELAAWLRLTETPGIGPVAARQLLAAFGLPQDIFRQSYAALAKVLPERQARALLA
EPDEALAALIERTAAWAAEPGNAIFTLADRGYPPRLLELPDPPTLLYAKGDVSLLRAAAVGVVGARSATAQGLENARAFA
QALSAANVTIISGLALGIDAAAHDGALTGPGNTIAVVGTGLDMVYPARNRALAHRIAEAGLILSEYPLGMGARAENFPRR
NRLIAGLARGLLVVEAAAQSGSLITARLAAEQGRDVFAIPGSIHSPLAKGCHLLIKQGAKLVETAADILEELGWSRTPAP
ATRTPRTAAQASAPASAPAARPAATAAETALLDALGFDPVDLDTLCERTCQTAASLSAQLLALELAGHIERQPGGRFLRL
P

Nucleotide

• Length: 1206 bp

>NTDB_id=625741 NY025_RS25185 WP_193026807.1 3705513..3706718(+) (dprA) [Ralstonia pseudosolanacearum strain LMG 9673]
TTGATCGATGCCTCACAGGTCGCGGCGCCCGCCGCGACCGCTCCCGCCGATTCCCTCGACGCCACGCGCGACCCCGCCGA
GCTGGCCGCCTGGCTGCGGCTGACGGAAACGCCAGGCATCGGCCCCGTCGCCGCACGGCAACTGCTGGCCGCCTTCGGGC
TGCCCCAGGACATCTTCCGTCAATCCTATGCGGCACTCGCCAAGGTGCTGCCTGAACGACAAGCGCGCGCGCTGCTGGCC
GAGCCGGACGAAGCGCTCGCCGCGCTGATCGAGCGGACCGCCGCCTGGGCCGCCGAACCGGGCAATGCCATCTTCACGCT
GGCCGACCGTGGCTACCCGCCGCGGCTGCTGGAACTCCCCGATCCGCCGACGCTGCTGTATGCCAAGGGCGATGTCTCGC
TGCTGCGGGCTGCGGCGGTGGGCGTGGTCGGCGCGCGCAGCGCCACCGCGCAGGGCCTGGAGAACGCCCGTGCCTTCGCG
CAGGCGCTGTCCGCCGCCAACGTGACGATCATCTCGGGGCTGGCGCTGGGCATCGATGCCGCCGCGCACGACGGCGCGCT
GACCGGGCCCGGCAACACCATCGCGGTGGTCGGCACGGGGCTGGACATGGTCTACCCTGCCCGGAACCGGGCCCTGGCAC
ACCGCATCGCCGAGGCCGGGCTGATCCTGTCGGAGTACCCGCTCGGCATGGGCGCACGGGCCGAGAACTTCCCGCGCCGC
AACCGGCTGATCGCCGGGCTCGCGCGCGGACTGCTGGTGGTGGAGGCGGCCGCGCAATCCGGTTCGCTGATCACCGCCCG
GCTGGCCGCCGAGCAGGGGCGCGATGTATTCGCCATTCCCGGCTCGATCCATTCGCCGCTGGCCAAGGGCTGCCACCTGC
TGATTAAGCAGGGCGCCAAACTGGTCGAGACGGCGGCCGACATCCTGGAAGAACTGGGCTGGAGCCGCACACCGGCGCCA
GCGACACGGACACCGCGTACGGCCGCCCAGGCTTCGGCCCCCGCATCCGCCCCGGCCGCACGTCCGGCGGCAACAGCGGC
GGAAACCGCGTTGCTCGATGCGCTCGGCTTCGACCCAGTCGACCTCGACACCCTGTGCGAACGCACCTGCCAGACCGCGG
CCAGCCTGTCGGCACAACTGCTGGCGCTGGAACTGGCAGGCCACATCGAGCGCCAGCCGGGCGGACGCTTTCTGCGACTG
CCGTAG

Domains

Predicted by InterProScan.

• DprA winged helix domain (WHD_DprA) (336-395)

• DNA recombination-mediator protein A (DNA_processg_A) (101-303)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio campbellii strain DS40M4	42.82	95.511	0.409
dprA	Neisseria gonorrhoeae MS11	42.159	97.007	0.409
dprA	Neisseria gonorrhoeae strain FA1090	41.902	97.007	0.406
dprA	Neisseria meningitidis MC58	41.432	97.506	0.404
dprA	Neisseria meningitidis strain C311	41.432	97.506	0.404
dprA	Vibrio cholerae O1 biovar El Tor strain E7946	38.684	94.763	0.367
dprA	Vibrio cholerae strain A1552	38.684	94.763	0.367