Detailed information NTG0618034

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: NU955_RS04370
• Genome accession: NZ_CP102762
• Coordinates: 918509..919627 (-)
• Length: 372 a.a.
• NCBI ID: WP_269440932.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain AOR07-BL
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 913509..924627

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NU955_RS04340	-	914337..915185 (+)	849	WP_000336554.1	class II glutamine amidotransferase	-
NU955_RS04345	-	915438..915893 (+)	456	WP_000782976.1	bacteriohemerythrin	-
NU955_RS04350	-	916046..917113 (+)	1068	WP_000092403.1	hypothetical protein	-
NU955_RS04355	-	917113..917436 (+)	324	WP_000442585.1	RnfH family protein	-
NU955_RS04360	-	917491..917889 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
NU955_RS04365	fur	918001..918438 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
NU955_RS04370	pilU	918509..919627 (-)	1119	WP_269440932.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
NU955_RS04375	pilT	919647..920684 (-)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
NU955_RS04380	-	920811..921503 (+)	693	WP_005129437.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41873.05 Da
• Isoelectric Point: 6.6943

>NTDB_id=618034 NU955_RS04370 WP_269440932.1 918509..919627(-) (pilU) [Acinetobacter baumannii strain AOR07-BL]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEIIGQLLHSIMSEKQRKEFAETRECNFAIMNRDKSA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAIIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=618034 NU955_RS04370 WP_269440932.1 918509..919627(-) (pilU) [Acinetobacter baumannii strain AOR07-BL]
ATGGATTTTAATGACCTGCTCAACCTCATGGTTGAAAAAAAATCATCCGACCTCTTTATTACAGATGGCGTTGCACCATC
AATGAAGATTAACGGACAAATTGTTCCCATTTCAAAAAATAGCCTTTCAGGCGAAATTATTGGGCAACTATTACACTCCA
TCATGAGTGAAAAACAACGCAAAGAATTTGCAGAGACTCGTGAATGTAACTTTGCGATTATGAACCGTGATAAAAGTGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAACGCGACATGCCAGGCATGGTACTACGTCGAATTGAAACCAAAATTCCTTCAAT
TGATGACTTGCAGTTACCACCTGTGCTTAAAGATTTATCTATGACCAAACGCGGCATTATTATTTTCGTAGGCGCGACAG
GTACAGGTAAATCCACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAGGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACATTACGACAAGCGCCGGATGTCATCTTAATTGGTGAGATTCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCCAACAACGCCAACCAAGCACTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGCCAGCTTTATATGGACTTGTCACTTAACTTAAAGGCTATAATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGAAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (32-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.661	100	0.769
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	54.054	99.462	0.538
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395
pilT	Legionella pneumophila strain Lp02	39.645	90.86	0.36
pilT	Legionella pneumophila strain ERS1305867	39.645	90.86	0.36