Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA3   Type   Regulator
Locus tag   SANR_RS08665 Genome accession   NC_022239
Coordinates   1769726..1771705 (-) Length   659 a.a.
NCBI ID   WP_020999800.1    Uniprot ID   A0AAN4P8U9
Organism   Streptococcus anginosus C238     
Function   binding to XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1764726..1776705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SANR_RS08645 (SANR_1678) amiF 1764917..1765840 (-) 924 WP_003031730.1 ATP-binding cassette domain-containing protein Regulator
  SANR_RS08650 (SANR_1679) amiE 1765851..1766918 (-) 1068 WP_020999798.1 ABC transporter ATP-binding protein Regulator
  SANR_RS08655 (SANR_1680) amiD 1766927..1767853 (-) 927 WP_003074404.1 oligopeptide ABC transporter permease OppC Regulator
  SANR_RS08660 (SANR_1681) amiC 1767853..1769349 (-) 1497 WP_020999799.1 ABC transporter permease Regulator
  SANR_RS08665 (SANR_1682) amiA3 1769726..1771705 (-) 1980 WP_020999800.1 peptide ABC transporter substrate-binding protein Regulator
  SANR_RS08670 (SANR_1683) amiA3 1771901..1773877 (-) 1977 WP_003035484.1 peptide ABC transporter substrate-binding protein Regulator
  SANR_RS08675 (SANR_1684) - 1774042..1774728 (-) 687 WP_020999801.1 B3/4 domain-containing protein -
  SANR_RS08680 (SANR_1685) - 1774959..1776569 (-) 1611 WP_003031779.1 CTP synthase -

Sequence

Protein


Download         Length: 659 a.a.        Molecular weight: 73207.75 Da        Isoelectric Point: 7.3315

>NTDB_id=61687 SANR_RS08665 WP_020999800.1 1769726..1771705(-) (amiA3) [Streptococcus anginosus C238]
MKKSKIITLAALALLATGALAACSSSKTSSGNKTFSYIYEQDPDNLNYLTTGKAATANLTSNVIDGLLENDRYGNLVPSV
AKDWTVSKDGLTYTYTLRKGVKWYTSEGEEYAEVKAQDFVTGLKYAADNKSDAIYLVQDSVKGLDAYMKGENKDFSSVGI
KAVDDYTVQYTLNRPESFWNSKTTMGVLAPVNAEFLKSKGNKFAQATDPSSLLYNGPYLLKSITAKSSVEFAKNPNYWDK
KNVHIDNIKLSYYDGQDQDKLAKGFSDGSFTNAKVFPTSPSYASVSKKYKNNIVYTPQDATTYLVATNIDRQSYNHTSKT
TDAQKTSTKKALLNKDFRQAITFAFDRTAYASQVNGKDGATKMLRNLFVPPTFVQTDDKSFGELVKEKLIGYDESWKDVN
LNDAQDGLYNPTKAKEKLAKAKAALQADGVQFPIHIDMPVDQTATNKVQRVQSLKQSIEKNLGKENVVIDIQQMSKDDVN
NITYFAESAAAEDWDLSDNVGWSPDFQDPSTYLDVIKPSSGESTKTYLGFDAGTNNAAAAQVGMNEYEKLLNEAEKETNN
TNARYEKYAAAQAWLTDNALVIPTTTLTGRPILSRTVPFSNAFAWSGNKGNSETILYKYLEIQDEPVTQNQYKKAMEKWN
KKRTESNKKAQEELADHVK

Nucleotide


Download         Length: 1980 bp        

>NTDB_id=61687 SANR_RS08665 WP_020999800.1 1769726..1771705(-) (amiA3) [Streptococcus anginosus C238]
ATGAAGAAAAGTAAAATCATTACCCTTGCAGCGCTAGCCTTGCTTGCAACAGGAGCTCTAGCAGCTTGTTCTAGCTCTAA
AACAAGCTCGGGGAACAAAACATTCTCATATATTTATGAGCAAGATCCAGATAACCTGAACTATTTGACAACTGGGAAAG
CAGCTACTGCAAATCTTACCAGTAATGTCATTGACGGACTCTTGGAAAATGACCGTTACGGAAATCTAGTTCCTTCTGTA
GCGAAGGATTGGACAGTCTCCAAGGATGGCTTGACTTATACTTATACACTTCGTAAGGGTGTGAAATGGTACACATCAGA
GGGTGAAGAGTATGCAGAAGTTAAGGCACAAGACTTTGTGACAGGCTTAAAATATGCTGCGGATAATAAATCTGATGCTA
TTTACTTGGTGCAAGATTCTGTTAAAGGCTTGGATGCTTACATGAAGGGTGAAAATAAAGATTTCTCTTCTGTCGGTATC
AAAGCAGTTGATGATTACACGGTTCAATACACGCTTAATCGACCAGAAAGCTTTTGGAATTCTAAAACAACAATGGGCGT
TCTAGCACCAGTTAATGCAGAATTTTTGAAATCAAAAGGCAATAAATTTGCACAAGCAACAGACCCATCTAGTCTTCTTT
ATAATGGTCCATACTTGCTGAAATCTATCACAGCGAAATCGTCTGTTGAATTTGCTAAAAATCCAAACTACTGGGATAAG
AAAAATGTGCACATTGACAACATCAAGCTGTCTTACTATGATGGTCAAGACCAAGACAAACTTGCTAAAGGATTTAGTGA
TGGCTCATTTACCAATGCTAAAGTATTTCCAACTAGCCCAAGTTATGCTTCTGTCAGCAAGAAATACAAAAACAACATCG
TTTATACTCCACAAGATGCAACAACTTACTTAGTAGCTACAAATATTGATCGTCAATCTTACAATCACACTTCAAAGACA
ACAGATGCTCAAAAAACTTCTACTAAGAAAGCTTTGCTAAACAAGGATTTCCGTCAAGCGATTACCTTTGCATTTGACCG
CACTGCTTATGCATCACAGGTGAATGGTAAAGACGGTGCGACGAAGATGCTCCGTAATCTCTTTGTACCACCAACGTTTG
TTCAAACAGATGACAAGAGCTTTGGAGAATTGGTCAAAGAAAAATTGATTGGCTACGATGAAAGTTGGAAAGATGTCAAC
TTAAATGATGCGCAAGATGGGCTTTATAATCCAACTAAAGCTAAAGAAAAATTAGCGAAAGCGAAAGCAGCGCTTCAAGC
AGATGGCGTTCAATTCCCAATCCACATTGATATGCCAGTTGATCAAACAGCAACTAATAAAGTTCAACGTGTGCAATCAT
TGAAACAATCTATTGAAAAAAATCTTGGGAAAGAAAATGTTGTGATTGATATTCAACAAATGTCTAAAGACGACGTGAAT
AATATCACTTACTTTGCCGAATCTGCAGCGGCAGAAGATTGGGATCTTTCTGATAATGTTGGTTGGAGTCCAGACTTCCA
AGACCCATCTACCTATCTTGATGTTATCAAGCCTTCAAGCGGTGAAAGCACTAAGACTTATCTAGGATTTGATGCAGGCA
CGAACAACGCTGCTGCAGCACAAGTTGGTATGAACGAATATGAAAAGTTGTTGAATGAGGCTGAAAAAGAAACCAACAAT
ACGAATGCACGTTATGAAAAATATGCTGCAGCACAAGCTTGGTTGACAGATAATGCATTAGTCATTCCAACAACAACACT
AACGGGTCGCCCAATTCTTTCTCGTACAGTACCATTTAGTAATGCCTTTGCTTGGTCAGGAAACAAGGGAAATAGTGAAA
CAATTCTCTATAAATACCTTGAAATCCAAGATGAGCCTGTGACTCAAAATCAATACAAGAAGGCAATGGAAAAATGGAAT
AAAAAGCGCACAGAGTCTAATAAAAAGGCTCAAGAAGAACTTGCAGATCATGTTAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-520)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA3 Streptococcus thermophilus LMD-9

61.061

100

0.612
  amiA3 Streptococcus thermophilus LMG 18311

60.455

100

0.605
  amiA Streptococcus salivarius strain HSISS4

60

100

0.601

Multiple sequence alignment