Detailed information NTG0615220

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LIO31_RS05240
• Genome accession: NZ_CP085086
• Coordinates: 1030117..1030959 (-)
• Length: 280 a.a.
• NCBI ID: WP_012775129.1
• Uniprot ID: -
• Organism: Streptococcus suis strain Ssuis_MA6
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1025117..1035959

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIO31_RS05220	-	1025555..1026304 (-)	750	WP_011922420.1	HAD family hydrolase	-
LIO31_RS05225	rplL	1026429..1026794 (-)	366	WP_002936483.1	50S ribosomal protein L7/L12	-
LIO31_RS05230	rplJ	1026860..1027354 (-)	495	WP_002936486.1	50S ribosomal protein L10	-
LIO31_RS05235	topA	1027931..1030024 (-)	2094	WP_074389881.1	type I DNA topoisomerase	-
LIO31_RS05240	dprA	1030117..1030959 (-)	843	WP_012775129.1	DNA-processing protein DprA	Machinery gene
LIO31_RS05245	-	1031018..1031575 (-)	558	WP_009909862.1	sugar O-acetyltransferase	-
LIO31_RS05250	-	1031586..1031846 (-)	261	WP_074389882.1	metal-sensitive transcriptional regulator	-
LIO31_RS05255	-	1031953..1032276 (+)	324	WP_024385727.1	rhodanese-like domain-containing protein	-
LIO31_RS05260	-	1032273..1033925 (+)	1653	WP_074389883.1	FAD-dependent oxidoreductase	-
LIO31_RS05265	-	1034033..1034584 (+)	552	WP_024405686.1	DUF1836 domain-containing protein	-
LIO31_RS05270	-	1034574..1035224 (+)	651	WP_024405685.1	hemolysin III family protein	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31246.14 Da
• Isoelectric Point: 8.4451

>NTDB_id=615220 LIO31_RS05240 WP_012775129.1 1030117..1030959(-) (dprA) [Streptococcus suis strain Ssuis_MA6]
MNNFELFKWKKAGLTNLNVNKVLAYQEKHGKKLTLRNVAVVSECKNPVLFMENYKNLDTKACREEFNKYPSFSILDDIYP
LALKQIYNPPVLLFYQGDLELLEKLKLAVVGTRNASKNGIQSVQKIIKELSNRFVIVSGLARGIDTAAHIASLKNGGQTI
AVIGTGLDNIYPKENKDLQTYIGKHHLVLTEYEAGAQPLKYHFPERNRIIAGLVEGLVVCEAKMRSGSLITCERALEEGR
EVYAIPGSIMDGKSDGCHHLIQEGAKCVTSGLDIISEYQF

Nucleotide

• Length: 843 bp

>NTDB_id=615220 LIO31_RS05240 WP_012775129.1 1030117..1030959(-) (dprA) [Streptococcus suis strain Ssuis_MA6]
ATGAATAATTTTGAATTGTTTAAATGGAAAAAAGCAGGTTTGACCAATCTTAATGTGAATAAAGTTTTGGCCTATCAAGA
AAAACACGGTAAAAAATTGACCTTGCGAAATGTCGCTGTAGTGTCTGAATGTAAAAATCCAGTGCTATTTATGGAAAATT
ATAAGAATCTAGATACAAAAGCCTGTCGCGAGGAATTTAATAAGTATCCATCATTTTCAATTTTAGATGACATCTATCCT
TTGGCGCTCAAACAGATTTACAATCCACCTGTACTTTTGTTTTATCAAGGGGATTTAGAATTGCTAGAAAAATTAAAGCT
GGCAGTTGTTGGTACACGAAATGCCAGTAAAAATGGTATCCAATCTGTTCAGAAAATTATCAAGGAATTGAGCAATCGTT
TTGTCATTGTTAGTGGTTTGGCAAGAGGAATTGATACAGCTGCCCACATCGCCAGTTTGAAAAATGGAGGCCAAACCATT
GCTGTAATCGGAACAGGTTTAGATAATATTTATCCAAAAGAAAATAAAGATTTGCAGACCTATATTGGAAAACACCATTT
GGTGCTGACAGAGTATGAAGCTGGTGCTCAGCCACTCAAATACCATTTTCCAGAACGCAATCGCATTATAGCTGGTTTGG
TGGAAGGATTGGTAGTCTGCGAGGCAAAAATGCGGTCTGGCAGCTTGATTACTTGTGAACGTGCCTTGGAAGAAGGAAGA
GAAGTCTATGCTATTCCAGGTTCCATTATGGACGGAAAATCAGATGGTTGTCATCATTTGATTCAAGAGGGAGCAAAGTG
CGTTACATCAGGATTGGACATCATTTCTGAGTATCAATTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (73-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	70	100	0.7
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	63.571	100	0.636
dprA/cilB/dalA	Streptococcus pneumoniae D39	63.571	100	0.636
dprA/cilB/dalA	Streptococcus pneumoniae R6	63.571	100	0.636
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	63.571	100	0.636
dprA/cilB/dalA	Streptococcus mitis SK321	63.571	100	0.636
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	63.571	100	0.636
dprA	Lactococcus lactis subsp. cremoris KW2	60	100	0.6
dprA	Legionella pneumophila strain ERS1305867	42.105	88.214	0.371
dprA	Bacillus subtilis subsp. subtilis str. 168	50.746	71.786	0.364