Detailed information NTG0610457

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: LDO71_RS01525
• Genome accession: NZ_CP084297
• Coordinates: 331700..332758 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain LHC22-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 326700..337758

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LDO71_RS01510 (LDO71_01510)	-	327806..328138 (+)	333	WP_000169602.1	hypothetical protein	-
LDO71_RS01515 (LDO71_01515)	-	328141..328965 (+)	825	WP_225546077.1	putative RNA methyltransferase	-
LDO71_RS01520 (LDO71_01520)	ponA	328983..331538 (-)	2556	WP_140334752.1	penicillin-binding protein PBP1a	-
LDO71_RS01525 (LDO71_01525)	pilM	331700..332758 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
LDO71_RS01530 (LDO71_01530)	pilN	332758..333399 (+)	642	WP_225546078.1	PilN domain-containing protein	Machinery gene
LDO71_RS01535 (LDO71_01535)	pilO	333396..334136 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
LDO71_RS01540 (LDO71_01540)	pilP	334147..334674 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
LDO71_RS01545 (LDO71_01545)	pilQ	334737..336863 (+)	2127	WP_225546079.1	type IV pilus secretin PilQ	Machinery gene
LDO71_RS01550 (LDO71_01550)	aroK	336875..337444 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=610457 LDO71_RS01525 WP_002014066.1 331700..332758(+) (pilM) [Acinetobacter baumannii strain LHC22-2]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=610457 LDO71_RS01525 WP_002014066.1 331700..332758(+) (pilM) [Acinetobacter baumannii strain LHC22-2]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAGCGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACCCGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAACGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GGAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGCTACCGTGTCACGATTGCCAACCCGTTCTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCCTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423