Detailed information NTG0603860

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: K9C16_RS01925
• Genome accession: NZ_CP082952
• Coordinates: 409767..410825 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain Cl300
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 404767..415825

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K9C16_RS01910 (K9C16_01915)	-	405873..406205 (+)	333	WP_000169602.1	hypothetical protein	-
K9C16_RS01915 (K9C16_01920)	-	406208..407032 (+)	825	WP_086221410.1	putative RNA methyltransferase	-
K9C16_RS01920 (K9C16_01925)	ponA	407050..409605 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
K9C16_RS01925 (K9C16_01930)	pilM	409767..410825 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
K9C16_RS01930 (K9C16_01935)	pilN	410825..411466 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
K9C16_RS01935 (K9C16_01940)	pilO	411463..412203 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
K9C16_RS01940 (K9C16_01945)	pilP	412214..412741 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
K9C16_RS01945 (K9C16_01950)	pilQ	412809..414974 (+)	2166	WP_029424115.1	type IV pilus secretin PilQ family protein	Machinery gene
K9C16_RS01950 (K9C16_01955)	aroK	414986..415555 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=603860 K9C16_RS01925 WP_002014066.1 409767..410825(+) (pilM) [Acinetobacter baumannii strain Cl300]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=603860 K9C16_RS01925 WP_002014066.1 409767..410825(+) (pilM) [Acinetobacter baumannii strain Cl300]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAACGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTTGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCCGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCATTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGATCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423