Detailed information NTG0603833

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: K8227_RS04860
• Genome accession: NZ_CP082948
• Coordinates: 991549..992391 (-)
• Length: 280 a.a.
• NCBI ID: WP_211838277.1
• Uniprot ID: -
• Organism: Streptococcus suis strain SZ1908
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 986549..997391

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K8227_RS04840 (K8227_04840)	-	986987..987736 (-)	750	WP_211838276.1	HAD family hydrolase	-
K8227_RS04845 (K8227_04845)	rplL	987861..988226 (-)	366	WP_002936483.1	50S ribosomal protein L7/L12	-
K8227_RS04850 (K8227_04850)	rplJ	988292..988786 (-)	495	WP_002936486.1	50S ribosomal protein L10	-
K8227_RS04855 (K8227_04855)	topA	989363..991456 (-)	2094	WP_012775596.1	type I DNA topoisomerase	-
K8227_RS04860 (K8227_04860)	dprA	991549..992391 (-)	843	WP_211838277.1	DNA-processing protein DprA	Machinery gene
K8227_RS04865 (K8227_04865)	-	992450..993007 (-)	558	WP_014917244.1	sugar O-acetyltransferase	-
K8227_RS04870 (K8227_04870)	-	993018..993278 (-)	261	WP_009909865.1	metal-sensitive transcriptional regulator	-
K8227_RS04875 (K8227_04875)	-	993385..993708 (+)	324	WP_012775130.1	rhodanese-like domain-containing protein	-
K8227_RS04880 (K8227_04880)	-	993705..995357 (+)	1653	WP_012775595.1	FAD-dependent oxidoreductase	-
K8227_RS04885 (K8227_04885)	-	995465..996016 (+)	552	WP_011922482.1	DUF1836 domain-containing protein	-
K8227_RS04890 (K8227_04890)	-	996006..996656 (+)	651	WP_002936498.1	hemolysin III family protein	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31231.13 Da
• Isoelectric Point: 8.2219

>NTDB_id=603833 K8227_RS04860 WP_211838277.1 991549..992391(-) (dprA) [Streptococcus suis strain SZ1908]
MNNFELFKWKKAGLTNLNVNKVLAYQEKHGKKLTLRNVAVVSECINPVLFMENYKNLDTKACREEFNKYPSFSILDDIYP
LALKQIYNPPVLLFYQGDLELLEKLKLAVVGTRNASKNGIQSVQKIIKELSNRFVIVSGLARGIDTAAHIASLKNGGQTI
AVIGTGLDNIYPKENKDLQTYIGKHHLVLTEYEAGAQPLKYHFPERNRIIAGLVEGLVVCEAKMRSGSLITCERALEEGR
EVYAIPGSIMDGKSDGCHHLIQEGAKCVTSGLDIISEYQF

Nucleotide

• Length: 843 bp

>NTDB_id=603833 K8227_RS04860 WP_211838277.1 991549..992391(-) (dprA) [Streptococcus suis strain SZ1908]
ATGAATAATTTTGAATTGTTTAAATGGAAAAAAGCAGGTTTGACCAATCTTAATGTGAATAAAGTTTTGGCCTATCAAGA
AAAACACGGTAAAAAATTGACCTTGCGAAATGTCGCTGTAGTGTCTGAATGTATAAATCCAGTGCTATTTATGGAAAATT
ATAAGAATCTAGATACAAAAGCCTGTCGCGAGGAATTTAATAAGTATCCATCATTTTCAATTTTAGATGACATCTATCCT
TTGGCGCTCAAACAGATTTACAATCCACCTGTACTTTTGTTTTATCAAGGGGATTTAGAATTGCTAGAAAAATTAAAGCT
GGCAGTTGTTGGTACACGAAATGCCAGTAAAAATGGTATCCAATCTGTTCAGAAAATTATCAAGGAATTGAGCAATCGTT
TTGTCATTGTTAGTGGTTTGGCAAGAGGAATTGATACAGCTGCCCACATCGCCAGTTTGAAAAATGGAGGCCAAACCATT
GCTGTAATCGGAACAGGTTTAGATAATATTTATCCAAAAGAAAATAAAGATTTGCAGACCTATATTGGAAAACACCATTT
GGTGCTGACAGAGTATGAAGCTGGTGCTCAGCCACTCAAATACCATTTTCCAGAACGCAATCGCATTATAGCTGGTTTGG
TGGAAGGATTGGTAGTCTGCGAGGCAAAAATGCGGTCTGGCAGCTTGATTACTTGTGAACGTGCCTTGGAAGAAGGAAGA
GAAGTCTATGCTATTCCAGGTTCCATTATGGACGGAAAATCAGATGGTTGTCATCATTTGATTCAAGAGGGAGCAAAGTG
CGTTACATCAGGATTGGACATCATTTCTGAGTATCAATTTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-61)

• DNA recombination-mediator protein A (DNA_processg_A) (73-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	69.643	100	0.696
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	63.571	100	0.636
dprA/cilB/dalA	Streptococcus pneumoniae D39	63.571	100	0.636
dprA/cilB/dalA	Streptococcus pneumoniae R6	63.571	100	0.636
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	63.571	100	0.636
dprA/cilB/dalA	Streptococcus mitis SK321	63.571	100	0.636
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	63.571	100	0.636
dprA	Lactococcus lactis subsp. cremoris KW2	59.643	100	0.596
dprA	Legionella pneumophila strain ERS1305867	42.739	86.071	0.368
dprA	Bacillus subtilis subsp. subtilis str. 168	50.746	71.786	0.364