Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   K7B13_RS05585 Genome accession   NZ_CP082278
Coordinates   1125559..1126215 (+) Length   218 a.a.
NCBI ID   WP_212100921.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain 35M     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1120559..1131215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K7B13_RS05555 (K7B13_05555) oppF 1121088..1122005 (+) 918 WP_045506975.1 oligopeptide ABC transporter ATP-binding protein OppF -
  K7B13_RS05560 (K7B13_05560) - 1122113..1123300 (+) 1188 WP_212100918.1 putative glycoside hydrolase -
  K7B13_RS05565 (K7B13_05565) - 1123418..1123996 (+) 579 WP_013351830.1 GNAT family N-acetyltransferase -
  K7B13_RS05570 (K7B13_05570) spx 1124174..1124569 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  K7B13_RS05575 (K7B13_05575) - 1124627..1125283 (-) 657 WP_065981171.1 TerC family protein -
  K7B13_RS05585 (K7B13_05585) mecA 1125559..1126215 (+) 657 WP_212100921.1 adaptor protein MecA Regulator
  K7B13_RS05590 (K7B13_05590) - 1126366..1127526 (+) 1161 WP_212100924.1 competence protein CoiA family protein -
  K7B13_RS05595 (K7B13_05595) pepF 1127755..1129584 (+) 1830 WP_013351834.1 oligoendopeptidase F Regulator
  K7B13_RS05600 (K7B13_05600) - 1129620..1129787 (-) 168 WP_016938224.1 hypothetical protein -
  K7B13_RS05605 (K7B13_05605) spxH 1130072..1130974 (-) 903 WP_013351835.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25996.80 Da        Isoelectric Point: 4.0863

>NTDB_id=600848 K7B13_RS05585 WP_212100921.1 1125559..1126215(+) (mecA) [Bacillus amyloliquefaciens strain 35M]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAENREEKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAQESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=600848 K7B13_RS05585 WP_212100921.1 1125559..1126215(+) (mecA) [Bacillus amyloliquefaciens strain 35M]
ATGGAAATAGAAAGAATTAATGAGCATACAGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAATCGGGAGGAGAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ACGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATTAAAACGACCCTATATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
AGAATCATCAGTCAGCATCCACCGTCTTGAAGAATACGGAAAATTGGTGATCGCTGATCATGCGTTATATACGATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

90.367

100

0.904