Detailed information NTG0600703

Bioinformatically predicted

Overview

• Name: pilS
• Type: Regulator
• Locus tag: K4O48_RS16455
• Genome accession: NZ_CP082271
• Coordinates: 3530022..3531614 (+)
• Length: 530 a.a.
• NCBI ID: WP_260523645.1
• Uniprot ID: -
• Organism: Pseudomonas sp. DNDY-54
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3525022..3536614

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K4O48_RS16435	pgeF	3526721..3527458 (-)	738	WP_222909446.1	peptidoglycan editing factor PgeF	-
K4O48_RS16440	rluD	3527455..3528429 (-)	975	WP_222909447.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
K4O48_RS16445	-	3528733..3529740 (+)	1008	WP_222909448.1	outer membrane protein assembly factor BamD	-
K4O48_RS16450	-	3529799..3530032 (+)	234	WP_222909449.1	PP0621 family protein	-
K4O48_RS16455	pilS	3530022..3531614 (+)	1593	WP_260523645.1	sensor histidine kinase	Regulator
K4O48_RS16460	pilR	3531727..3533064 (+)	1338	WP_222909451.1	sigma-54-dependent transcriptional regulator	Regulator
K4O48_RS16465	-	3533099..3534154 (-)	1056	WP_222909452.1	DUF2333 family protein	-
K4O48_RS16470	-	3534375..3535988 (+)	1614	WP_222909453.1	PleD family two-component system response regulator	-

Sequence

Protein

• Length: 530 a.a.
• Molecular weight: 59123.26 Da
• Isoelectric Point: 7.8822

>NTDB_id=600703 K4O48_RS16455 WP_260523645.1 3530022..3531614(+) (pilS) [Pseudomonas sp. DNDY-54]
MVTEHLTFLGQQGRRILRLYHLYRVAIGLVLVLLISSDLHSDLMRMINPGAFHFGAWLYLILNILIAVLLQNPKRELPVL
ALALLDVTQLAALFYFAGGTPSGIGNLLIVAVAIANILLHGRVGFFIAAVAAAGLIYLTFYLSLNDSAASSQYVQAAALG
TLCFAAALLVQGLTRRLQVSETLARQRAEEVANLEALNAQILQRMRTGILVLDSQERILLANQGALELLGQQELTGERLA
PRCPDLIKGLQQWRDNPTLRPRNFKATAEGATLQPSFATLQHGVKQDTLVFLEDISHIAQKAQQLKLASLGRLTASIAHE
IRNPLGAISHAAQLLQESEMLDAADLRLTQIIQDHSRRMNLVIENILQLSRRRQAEPQLLDLKYWVHRFASEFRETLPAD
QQVHVETRGSSLQTRMDPNQLIQVLTNLVQNGLRYSGHNRKQSQVWLKLFRDESSDLPVLEVLDDGPGVPAEQVQNIFEP
FFTTENKGTGLGLYISRELCESNQARLDYRERDEGGSCFRIVFAHPRKLS

Nucleotide

• Length: 1593 bp

>NTDB_id=600703 K4O48_RS16455 WP_260523645.1 3530022..3531614(+) (pilS) [Pseudomonas sp. DNDY-54]
GTGGTAACTGAGCACCTGACGTTCCTAGGCCAGCAGGGCCGACGGATCCTTCGCCTCTATCATCTTTATCGCGTCGCGAT
TGGCCTCGTGCTGGTCCTGCTCATCAGCAGCGATCTACACAGCGACCTGATGCGCATGATCAACCCAGGCGCGTTTCACT
TCGGCGCCTGGCTTTACCTGATTCTCAACATCCTCATCGCCGTGCTGCTGCAGAACCCGAAACGGGAACTGCCTGTTCTG
GCGCTCGCCCTGTTAGACGTGACCCAACTCGCGGCGCTGTTCTACTTTGCCGGCGGGACACCCAGCGGCATTGGCAACCT
GCTGATTGTCGCGGTCGCCATCGCGAATATCCTGCTGCACGGCCGCGTTGGTTTTTTTATTGCCGCAGTTGCCGCAGCCG
GGCTCATCTACCTGACCTTTTATTTAAGCCTCAACGATAGCGCTGCGAGCAGCCAGTATGTTCAGGCTGCCGCACTGGGC
ACGCTGTGTTTTGCAGCGGCGTTGCTGGTACAAGGGTTGACCCGACGCCTGCAGGTCAGCGAAACCCTCGCTCGGCAGCG
CGCCGAGGAAGTCGCGAATCTCGAAGCGCTGAACGCGCAAATCCTGCAACGCATGCGCACCGGGATCCTCGTGCTCGACT
CTCAGGAGCGCATACTGCTGGCCAATCAGGGCGCACTCGAATTGCTCGGGCAGCAGGAATTGACGGGCGAACGCCTCGCA
CCGCGCTGTCCCGATCTGATCAAAGGCTTGCAGCAGTGGCGTGACAATCCGACGCTGCGGCCTCGCAACTTCAAGGCAAC
CGCCGAAGGCGCCACACTTCAGCCAAGCTTCGCCACTCTGCAACACGGCGTAAAGCAGGACACATTGGTCTTTCTCGAAG
ACATCTCACACATCGCGCAGAAGGCGCAGCAGCTCAAGCTCGCCTCACTGGGCCGCTTGACTGCGAGCATCGCCCACGAG
ATCCGCAATCCGCTCGGCGCGATCAGCCATGCCGCTCAGCTGCTGCAGGAGTCGGAGATGCTCGACGCAGCGGATCTACG
ACTCACGCAGATCATCCAGGATCATTCGCGACGAATGAACCTCGTGATCGAGAATATCCTTCAGCTGTCGCGCCGTCGCC
AAGCGGAGCCGCAGCTCCTAGATCTGAAATACTGGGTACATCGGTTCGCCAGCGAATTTCGCGAAACGTTGCCAGCCGAC
CAACAGGTGCATGTGGAGACCCGTGGCAGTTCACTGCAAACCCGCATGGACCCGAATCAGCTGATCCAGGTCCTGACTAA
CCTGGTGCAGAATGGACTGCGCTACAGCGGCCACAATCGCAAGCAGTCGCAGGTATGGCTCAAGTTGTTCCGTGACGAAA
GCAGTGACCTGCCGGTGCTTGAAGTGCTTGATGACGGACCGGGCGTGCCGGCTGAGCAGGTTCAGAATATCTTCGAGCCA
TTTTTCACGACGGAAAACAAGGGCACCGGACTGGGGCTCTATATTTCCCGGGAGTTGTGTGAAAGCAATCAGGCTCGTCT
GGACTATCGTGAACGAGACGAGGGCGGTAGCTGCTTTCGTATCGTCTTCGCACATCCGCGCAAGCTGAGCTAA

Domains

Predicted by InterproScan.

• PAS domain (PAS_8) (201-249)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (417-523)

• His Kinase A (phospho-acceptor) domain (HisKA) (309-373)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilS	Pseudomonas aeruginosa PAK	64.717	100	0.647