Detailed information NTG0599880

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: K6976_RS05315
• Genome accession: NZ_CP082202
• Coordinates: 1066038..1066880 (+)
• Length: 280 a.a.
• NCBI ID: WP_205014299.1
• Uniprot ID: -
• Organism: Streptococcus suis strain SS389
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1061038..1071880

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6976_RS05285 (K6976_05285)	-	1061833..1062606 (+)	774	WP_222760122.1	ribonuclease HII	-
K6976_RS05290 (K6976_05290)	-	1062609..1063619 (+)	1011	WP_222760123.1	YdcF family protein	-
K6976_RS05295 (K6976_05295)	-	1063653..1064303 (-)	651	WP_136581275.1	hemolysin III family protein	-
K6976_RS05300 (K6976_05300)	-	1064293..1064739 (-)	447	WP_136581276.1	DUF1836 domain-containing protein	-
K6976_RS05305 (K6976_05305)	-	1064981..1065292 (-)	312	WP_222760124.1	rhodanese-like domain-containing protein	-
K6976_RS05310 (K6976_05310)	-	1065422..1065979 (+)	558	WP_222760125.1	sugar O-acetyltransferase	-
K6976_RS05315 (K6976_05315)	dprA	1066038..1066880 (+)	843	WP_205014299.1	DNA-processing protein DprA	Machinery gene
K6976_RS05320 (K6976_05320)	topA	1066973..1069066 (+)	2094	WP_004195696.1	type I DNA topoisomerase	-
K6976_RS05325 (K6976_05325)	rplJ	1069634..1070128 (+)	495	WP_105184245.1	50S ribosomal protein L10	-
K6976_RS05330 (K6976_05330)	rplL	1070194..1070559 (+)	366	WP_002936483.1	50S ribosomal protein L7/L12	-
K6976_RS05335 (K6976_05335)	-	1070684..1071433 (+)	750	WP_105184246.1	HAD family hydrolase	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31234.09 Da
• Isoelectric Point: 8.4451

>NTDB_id=599880 K6976_RS05315 WP_205014299.1 1066038..1066880(+) (dprA) [Streptococcus suis strain SS389]
MNNFELFKWKKAGLTNLNINKVLAYQEKHGKKLTLRNVAVVSECKNPVLFMENYKNLDTKACREEFNKYPSFSILDDIYP
LALKQIYNPPVLLFYQGDLELLEKSKLAVVGTRNASKNGVQSVQKIIKELSNRFVIVSGLARGIDTAAHIASLKNGGQTI
AVIGTGLDNIYPKENKDLQTYIGKHHLVLTEYEAGAQPLKYHFPERNRIIAGLVEGLVVCEAKMRSGSLITCERALEEGR
EVYAIPGSIMDGKSDGCHHLIQEGAKCITSGLDIISEYQF

Nucleotide

• Length: 843 bp

>NTDB_id=599880 K6976_RS05315 WP_205014299.1 1066038..1066880(+) (dprA) [Streptococcus suis strain SS389]
ATGAATAATTTTGAATTGTTTAAATGGAAAAAAGCAGGTTTGACCAATCTTAATATTAATAAAGTTTTGGCCTATCAAGA
AAAACACGGTAAAAAATTGACCTTACGTAACGTCGCTGTAGTGTCTGAATGTAAAAATCCAGTGCTATTTATGGAAAATT
ATAAGAATCTAGATACAAAAGCCTGTCGCGAGGAATTTAATAAGTATCCATCATTTTCAATTTTAGATGATATCTATCCT
TTGGCGCTCAAACAGATTTACAATCCACCTGTACTTTTGTTTTATCAAGGGGATTTAGAATTGCTAGAAAAATCAAAGCT
GGCAGTTGTTGGTACACGAAATGCCAGTAAAAATGGTGTTCAGTCAGTTCAGAAGATTATCAAGGAATTGAGTAATCGCT
TTGTCATTGTTAGTGGTTTGGCAAGAGGAATTGATACGGCTGCCCACATCGCCAGTTTGAAAAATGGAGGCCAAACCATT
GCTGTAATCGGAACAGGTTTAGATAATATTTATCCAAAAGAAAATAAAGATTTGCAGACCTACATTGGCAAACACCATCT
GGTACTGACAGAGTATGAAGCTGGTGCTCAGCCACTCAAATACCATTTCCCTGAACGGAATCGGATTATTGCAGGGTTGG
TAGAAGGTCTGGTGGTCTGTGAGGCGAAAATGCGATCTGGTAGCTTGATTACCTGCGAACGTGCCTTGGAAGAAGGAAGA
GAAGTCTATGCTATTCCAGGTTCCATTATGGACGGAAAATCAGATGGTTGTCATCATCTGATTCAAGAGGGGGCAAAGTG
CATCACATCAGGCTTGGACATCATTTCTGAGTATCAATTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (73-269)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	71.071	100	0.711
dprA/cilB/dalA	Streptococcus mitis SK321	63.571	100	0.636
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	63.571	100	0.636
dprA/cilB/dalA	Streptococcus pneumoniae D39	63.571	100	0.636
dprA/cilB/dalA	Streptococcus pneumoniae R6	63.571	100	0.636
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	63.571	100	0.636
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	62.857	100	0.629
dprA	Lactococcus lactis subsp. cremoris KW2	58.929	100	0.589
dprA	Bacillus subtilis subsp. subtilis str. 168	51.244	71.786	0.368
dprA	Legionella pneumophila strain ERS1305867	41.7	88.214	0.368