Detailed information NTG0598519

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: K5O18_RS00190
• Genome accession: NZ_CP081939
• Coordinates: 40874..41974 (+)
• Length: 366 a.a.
• NCBI ID: WP_110479718.1
• Uniprot ID: A0AAE5WGS2
• Organism: Avibacterium paragallinarum strain p4chr1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 35874..46974

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K5O18_RS00165 (K5O18_00165)	mog	36616..37194 (+)	579	WP_110479722.1	molybdopterin adenylyltransferase	-
K5O18_RS00170 (K5O18_00170)	glnB	37223..37561 (+)	339	WP_017805299.1	nitrogen regulatory protein P-II	-
K5O18_RS00175 (K5O18_00175)	-	37564..38616 (+)	1053	WP_110479721.1	AI-2E family transporter	-
K5O18_RS00180 (K5O18_00180)	-	38984..40153 (+)	1170	WP_110479720.1	bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN	-
K5O18_RS00185 (K5O18_00185)	pilF/pilF2	40187..40729 (+)	543	WP_110479719.1	type IV pilus biogenesis/stability protein PilW	Machinery gene
K5O18_RS00190 (K5O18_00190)	dprA	40874..41974 (+)	1101	WP_110479718.1	DNA-processing protein DprA	Machinery gene
K5O18_RS00195 (K5O18_00195)	rsmD	41971..42579 (-)	609	WP_110479717.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
K5O18_RS00200 (K5O18_00200)	ftsY	42735..44078 (+)	1344	WP_222593712.1	signal recognition particle-docking protein FtsY	-
K5O18_RS00205 (K5O18_00205)	glpQ	44638..45732 (-)	1095	WP_110479715.1	glycerophosphodiester phosphodiesterase	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 40903.71 Da
• Isoelectric Point: 4.8599

>NTDB_id=598519 K5O18_RS00190 WP_110479718.1 40874..41974(+) (dprA) [Avibacterium paragallinarum strain p4chr1]
MITNEMLLRLLQIPKLGANTIQKILGEISLTQLLDYDEYAFKQIGWSEKQIQRWFYPERKFIDPALQWAESAGNFLLNFT
DEDYPYLLKQIPSAPPILFLQGNLTALSQPQIAIVGSRYCSNYGEYWAKYFASELSLAGFAITSGLALGIDGFCHQAVVD
IQGQTLAVLGSGLDKVYPAKHRRLAEQIIEHNGTLISEFLPAQPPVAENFPRRNRIISGLSLGTLIIEATERSGSLITAR
YALEQNREIFALPGNIQNGFSEGCHKLIKQGATLVESVTDILENLPHYQYVTPNYTEQKSPSSANEQLTSEPPSYPELYA
QLSHIPISLDELSARLSLPIDVLLTQLLSLELQQLAVCENGLYRRS

Nucleotide

• Length: 1101 bp

>NTDB_id=598519 K5O18_RS00190 WP_110479718.1 40874..41974(+) (dprA) [Avibacterium paragallinarum strain p4chr1]
ATGATAACCAATGAGATGTTACTTCGTTTGCTCCAAATTCCTAAACTTGGAGCAAATACTATTCAAAAAATACTGGGTGA
AATTAGTCTTACACAGCTTTTAGATTATGATGAATACGCGTTTAAACAGATTGGTTGGTCAGAAAAGCAAATTCAACGTT
GGTTTTACCCAGAACGAAAATTCATTGATCCTGCGTTACAATGGGCAGAAAGTGCGGGTAATTTTTTGCTTAATTTTACC
GATGAAGATTACCCTTATTTGCTGAAGCAAATTCCCTCCGCCCCGCCGATTTTATTTTTGCAAGGAAATTTGACCGCACT
TTCTCAACCACAAATTGCAATAGTAGGTAGCCGTTATTGCTCGAATTATGGGGAATATTGGGCGAAGTATTTTGCTTCAG
AGTTGAGTCTTGCGGGCTTTGCGATAACCAGTGGGCTAGCTTTAGGGATCGACGGATTTTGTCATCAAGCCGTGGTGGAT
ATTCAAGGGCAAACGCTGGCGGTGCTTGGAAGTGGGTTGGATAAGGTGTATCCTGCAAAACATCGCCGTTTGGCTGAGCA
AATTATTGAGCATAACGGCACATTGATTTCCGAATTTCTCCCCGCACAACCGCCCGTTGCGGAGAATTTCCCACGCCGAA
ACCGTATTATTAGCGGGCTTTCGCTTGGCACGCTAATTATTGAAGCCACCGAGCGGAGCGGTTCACTCATTACGGCTCGT
TATGCGTTGGAGCAAAACCGTGAGATCTTTGCCTTGCCGGGCAATATTCAAAATGGCTTTAGTGAGGGCTGTCATAAGCT
CATCAAACAAGGGGCGACATTAGTGGAGAGCGTGACGGATATTTTAGAAAATCTCCCACATTATCAGTATGTTACACCGA
ATTATACCGAACAGAAATCGCCATCGTCGGCGAACGAGCAGCTAACTTCAGAGCCACCAAGTTATCCCGAACTTTACGCT
CAATTAAGCCACATTCCCATTAGCCTTGATGAACTTTCAGCCCGTTTGTCATTGCCGATTGATGTCTTATTAACCCAATT
ATTAAGTTTAGAATTGCAACAATTAGCGGTTTGTGAAAATGGGCTGTATCGGCGAAGTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-276)

• DprA winged helix domain (DprA_WH) (312-357)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	62.703	100	0.634
dprA	Glaesserella parasuis strain SC1401	57.307	95.355	0.546
dprA	Vibrio cholerae strain A1552	43.716	100	0.437
dprA	Vibrio campbellii strain DS40M4	42.061	98.087	0.413
dprA	Legionella pneumophila strain ERS1305867	40.71	100	0.407
dprA	Acinetobacter baumannii strain A118	43.421	83.06	0.361