Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | J451_RS06090 | Genome accession | NC_021739 |
| Coordinates | 1188759..1189097 (+) | Length | 112 a.a. |
| NCBI ID | WP_006251644.1 | Uniprot ID | A0A248ZWT2 |
| Organism | Mannheimia haemolytica D174 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1183759..1194097
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J451_RS06065 (J451_06165) | rpsL | 1183998..1184372 (-) | 375 | WP_021265415.1 | 30S ribosomal protein S12 | - |
| J451_RS06070 (J451_06170) | rfaC | 1184493..1185452 (-) | 960 | WP_006250332.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| J451_RS06075 (J451_06175) | waaF | 1185519..1186556 (-) | 1038 | WP_006250331.1 | lipopolysaccharide heptosyltransferase II | - |
| J451_RS06080 (J451_06180) | - | 1186667..1187083 (-) | 417 | WP_006250330.1 | MliC family protein | - |
| J451_RS06085 (J451_06185) | - | 1187147..1188466 (-) | 1320 | WP_006253337.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| J451_RS06090 (J451_06190) | comEA/comE1 | 1188759..1189097 (+) | 339 | WP_006251644.1 | ComEA family DNA-binding protein | Machinery gene |
| J451_RS06095 (J451_06195) | asd | 1189262..1190155 (+) | 894 | WP_006250004.1 | archaetidylserine decarboxylase | - |
| J451_RS06100 (J451_06200) | hsdR | 1190227..1192578 (+) | 2352 | WP_006250003.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
| J451_RS06105 (J451_06205) | - | 1192626..1194095 (+) | 1470 | WP_006250002.1 | class I SAM-dependent DNA methyltransferase | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12111.91 Da Isoelectric Point: 10.0993
>NTDB_id=59822 J451_RS06090 WP_006251644.1 1188759..1189097(+) (comEA/comE1) [Mannheimia haemolytica D174]
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
Nucleotide
Download Length: 339 bp
>NTDB_id=59822 J451_RS06090 WP_006251644.1 1188759..1189097(+) (comEA/comE1) [Mannheimia haemolytica D174]
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCTAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCTAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.292 |
100 |
0.598 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.747 |
81.25 |
0.429 |
| comEA | Vibrio cholerae C6706 |
54.651 |
76.786 |
0.42 |
| comEA | Vibrio cholerae strain A1552 |
54.651 |
76.786 |
0.42 |