Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   K2L43_RS15485 Genome accession   NZ_CP080761
Coordinates   3244349..3244741 (-) Length   130 a.a.
NCBI ID   WP_015914196.1    Uniprot ID   A0AAX1WT95
Organism   Diaphorobacter sp. MNS-0     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3239349..3249741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K2L43_RS15470 (K2L43_15470) - 3241142..3243406 (-) 2265 WP_220637934.1 methyl-accepting chemotaxis protein -
  K2L43_RS15475 (K2L43_15475) - 3243428..3243955 (-) 528 WP_011806673.1 chemotaxis protein CheW -
  K2L43_RS15480 (K2L43_15480) - 3243972..3244337 (-) 366 WP_011806674.1 PleD family two-component system response regulator -
  K2L43_RS15485 (K2L43_15485) pilG 3244349..3244741 (-) 393 WP_015914196.1 PleD family two-component system response regulator Regulator
  K2L43_RS15490 (K2L43_15490) - 3244793..3244945 (-) 153 WP_011806676.1 rubredoxin -
  K2L43_RS15495 (K2L43_15495) - 3245061..3246005 (+) 945 WP_011806677.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  K2L43_RS15500 (K2L43_15500) hemL 3245989..3247293 (+) 1305 WP_220637935.1 glutamate-1-semialdehyde 2,1-aminomutase -
  K2L43_RS15505 (K2L43_15505) - 3247476..3249236 (+) 1761 WP_220637936.1 alkaline phosphatase -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14449.60 Da        Isoelectric Point: 6.9235

>NTDB_id=594791 K2L43_RS15485 WP_015914196.1 3244349..3244741(-) (pilG) [Diaphorobacter sp. MNS-0]
MATTTTGPTFRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNAR
FADTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNAQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=594791 K2L43_RS15485 WP_015914196.1 3244349..3244741(-) (pilG) [Diaphorobacter sp. MNS-0]
TTGGCTACGACGACGACCGGTCCCACCTTCCGTGTCCTGGTGGTGGACGACAGCAATACCATACGGCGCAGCGCCGAAAT
TTTCCTCAAGCAGGGAGGGCACGAGGTTTTATTGGCCGACGATGGTTTCGATGCCTTGGCCAAAGTCAATGATTACCAGC
CTCAGCTGATTTTCTGCGACATCCTCATGCCCAAGCTGGATGGTTATCAGACCTGCGCCATCATCAAACGCAACGCGCGT
TTTGCTGATACGCCCGTGGTAATGCTTTCATCCAAGGACGGGGTTTTCGATAAGGCGCGCGGCCGCATGGTCGGTTGCCA
GGAATATCTGACCAAACCATTTACCAAAGACCAGTTGCTGCAGGCTGTGCAGCAATTTGGAAATGCCCAATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

56.41

90

0.508