Detailed information NTG0594790

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: K2L43_RS15195
• Genome accession: NZ_CP080761
• Coordinates: 3181928..3183076 (+)
• Length: 382 a.a.
• NCBI ID: WP_196995883.1
• Uniprot ID: -
• Organism: Diaphorobacter sp. MNS-0
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3176928..3188076

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K2L43_RS15175 (K2L43_15175)	coaD	3177783..3178280 (-)	498	WP_011806614.1	pantetheine-phosphate adenylyltransferase	-
K2L43_RS15180 (K2L43_15180)	rsmD	3178426..3179049 (-)	624	WP_220637908.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
K2L43_RS15185 (K2L43_15185)	-	3179046..3180428 (-)	1383	WP_220637909.1	pitrilysin family protein	-
K2L43_RS15190 (K2L43_15190)	-	3180444..3181898 (-)	1455	WP_220637910.1	pitrilysin family protein	-
K2L43_RS15195 (K2L43_15195)	pilA	3181928..3183076 (+)	1149	WP_196995883.1	signal recognition particle-docking protein FtsY	Machinery gene
K2L43_RS15200 (K2L43_15200)	cutA	3183127..3183489 (-)	363	WP_220637911.1	divalent-cation tolerance protein CutA	-
K2L43_RS15205 (K2L43_15205)	rpoH	3183680..3184615 (+)	936	WP_220637912.1	RNA polymerase sigma factor RpoH	-
K2L43_RS15210 (K2L43_15210)	-	3184743..3185753 (+)	1011	WP_103737130.1	tripartite tricarboxylate transporter substrate binding protein	-
K2L43_RS15215 (K2L43_15215)	-	3186001..3186783 (+)	783	WP_220637913.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 39755.51 Da
• Isoelectric Point: 6.0008

>NTDB_id=594790 K2L43_RS15195 WP_196995883.1 3181928..3183076(+) (pilA) [Diaphorobacter sp. MNS-0]
MFSFFKKKSPAPAEPALAPEDVASPAAPPAADAPASGGAFGWLRKPFGAGATSVAEPAAPSAGAPAAIDVPLAVPEPTPK
PGGARQGWMDRLKSGLRKTGSSIATVFTGTQINDALYDELEEALLMADTGVKATQHLLEDLKRRVKETKTTEPAAVKGLL
ADALADLLRPLEKPLVIGEHTPTVIMVAGVNGAGKTTSIGKLTKHLADHGESVLLAAADTFRAAAREQLGVWATRNTVEI
VSQEGGDPAAVSFDAVTAGRARGKDVVLVDTAGRLPTQLHLMEELKKIRRVVTKADASAPHEVLLVIDGNTGQNALAQVR
AFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPVPVYFIGVGEKVEDLETFSAREFAQALLT

Nucleotide

• Length: 1149 bp

>NTDB_id=594790 K2L43_RS15195 WP_196995883.1 3181928..3183076(+) (pilA) [Diaphorobacter sp. MNS-0]
ATGTTCAGTTTTTTCAAGAAAAAATCGCCCGCCCCCGCCGAACCCGCCCTTGCACCCGAGGACGTGGCCAGCCCTGCGGC
GCCGCCCGCAGCCGACGCCCCCGCCAGTGGCGGAGCATTCGGCTGGCTGCGCAAGCCCTTTGGCGCAGGCGCCACCAGCG
TGGCGGAGCCGGCTGCCCCTTCGGCCGGCGCCCCCGCAGCCATCGACGTGCCCCTTGCCGTCCCCGAGCCCACCCCGAAG
CCCGGGGGCGCACGCCAGGGCTGGATGGACCGGCTGAAATCCGGCCTGCGCAAGACCGGCAGCAGCATCGCGACCGTCTT
CACGGGCACGCAGATCAACGACGCGCTGTACGACGAACTGGAGGAAGCCCTGCTCATGGCCGACACCGGGGTGAAAGCCA
CACAGCACCTGCTGGAGGACCTCAAGCGCCGCGTGAAAGAGACCAAGACCACCGAGCCTGCTGCCGTAAAGGGACTGCTG
GCCGATGCGCTGGCCGACCTGCTGCGGCCGCTGGAAAAGCCGCTGGTGATCGGCGAGCACACACCCACCGTGATCATGGT
GGCCGGCGTGAACGGCGCGGGCAAGACCACCTCCATCGGCAAGCTCACCAAGCACCTGGCCGACCATGGCGAGAGCGTGC
TGCTGGCCGCCGCCGATACCTTCCGCGCCGCGGCGCGCGAGCAGTTGGGTGTCTGGGCCACGCGCAACACGGTGGAGATC
GTCAGCCAGGAAGGGGGCGACCCTGCCGCCGTGAGCTTTGACGCCGTTACCGCCGGCCGCGCGCGCGGCAAAGATGTGGT
GCTGGTGGACACCGCCGGCCGCCTGCCTACGCAGCTGCACCTGATGGAAGAGCTGAAGAAGATCCGCCGCGTGGTCACCA
AGGCCGATGCCAGCGCCCCGCACGAGGTGCTACTGGTGATCGACGGCAACACCGGCCAGAACGCCCTGGCGCAGGTGCGC
GCGTTCGACGACGCGCTTCAACTCACCGGCCTGATCGTCACCAAACTGGACGGCACGGCCAAGGGCGGCGTGCTGGCCGC
CATCGCGCAGGAGCGGCCCGTGCCCGTGTACTTCATTGGCGTGGGCGAGAAAGTGGAAGACCTGGAGACCTTCAGCGCAC
GCGAATTCGCCCAGGCCCTGCTGACCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (182-381)

• SRP54-type protein, helical bundle domain (SRP54_N) (101-164)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.24	100	0.547