Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | KZZ50_RS10160 | Genome accession | NZ_CP080251 |
| Coordinates | 2044764..2045234 (-) | Length | 156 a.a. |
| NCBI ID | WP_000934760.1 | Uniprot ID | A0AAN2D761 |
| Organism | Staphylococcus aureus strain NT_611 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2014786..2068285 | 2044764..2045234 | within | 0 |
Gene organization within MGE regions
Location: 2014786..2068285
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KZZ50_RS09955 (KZZ50_09925) | scn | 2014786..2015136 (-) | 351 | WP_000702262.1 | complement inhibitor SCIN-A | - |
| KZZ50_RS09960 (KZZ50_09930) | - | 2015819..2016268 (+) | 450 | WP_000727645.1 | chemotaxis-inhibiting protein CHIPS | - |
| KZZ50_RS09965 (KZZ50_09935) | - | 2016363..2016697 (-) | 335 | Protein_1930 | SH3 domain-containing protein | - |
| KZZ50_RS09970 (KZZ50_09940) | sak | 2017348..2017839 (-) | 492 | WP_000920042.1 | staphylokinase | - |
| KZZ50_RS09975 (KZZ50_09945) | - | 2018030..2018785 (-) | 756 | WP_000861026.1 | CHAP domain-containing protein | - |
| KZZ50_RS09980 (KZZ50_09950) | - | 2018797..2019051 (-) | 255 | WP_000611512.1 | phage holin | - |
| KZZ50_RS09985 (KZZ50_09955) | - | 2019103..2019210 (+) | 108 | WP_031762631.1 | hypothetical protein | - |
| KZZ50_RS09990 (KZZ50_09960) | pepG1 | 2019263..2019397 (-) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| KZZ50_RS09995 (KZZ50_09965) | sep | 2019642..2020424 (-) | 783 | WP_000034846.1 | staphylococcal enterotoxin type P | - |
| KZZ50_RS10000 (KZZ50_09970) | - | 2020831..2021205 (-) | 375 | WP_000340977.1 | hypothetical protein | - |
| KZZ50_RS10005 (KZZ50_09975) | - | 2021261..2021548 (-) | 288 | WP_031865201.1 | hypothetical protein | - |
| KZZ50_RS10010 (KZZ50_09980) | - | 2021594..2021746 (-) | 153 | WP_001000058.1 | hypothetical protein | - |
| KZZ50_RS10015 (KZZ50_09985) | - | 2021739..2025521 (-) | 3783 | WP_031865200.1 | phage tail spike protein | - |
| KZZ50_RS10020 (KZZ50_09990) | - | 2025537..2027021 (-) | 1485 | WP_000567390.1 | phage tail domain-containing protein | - |
| KZZ50_RS10025 (KZZ50_09995) | - | 2027018..2031550 (-) | 4533 | WP_072519234.1 | phage tail tape measure protein | - |
| KZZ50_RS14055 | - | 2031607..2031741 (-) | 135 | WP_000364140.1 | hypothetical protein | - |
| KZZ50_RS10030 (KZZ50_10000) | - | 2031795..2032145 (-) | 351 | WP_001096355.1 | hypothetical protein | - |
| KZZ50_RS10035 (KZZ50_10005) | - | 2032195..2032425 (-) | 231 | Protein_1945 | Ig-like domain-containing protein | - |
| KZZ50_RS10040 (KZZ50_10010) | - | 2032461..2033105 (-) | 645 | WP_000268740.1 | major tail protein | - |
| KZZ50_RS10045 (KZZ50_10015) | - | 2033106..2033513 (-) | 408 | WP_000565498.1 | hypothetical protein | - |
| KZZ50_RS10050 (KZZ50_10020) | - | 2033510..2033914 (-) | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| KZZ50_RS10055 (KZZ50_10025) | - | 2033911..2034273 (-) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| KZZ50_RS10060 (KZZ50_10030) | - | 2034257..2034541 (-) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| KZZ50_RS10065 (KZZ50_10035) | - | 2034531..2034815 (-) | 285 | WP_000238236.1 | hypothetical protein | - |
| KZZ50_RS10070 (KZZ50_10040) | - | 2034835..2035980 (-) | 1146 | WP_000154559.1 | phage major capsid protein | - |
| KZZ50_RS10075 (KZZ50_10045) | - | 2036004..2036741 (-) | 738 | WP_000642728.1 | head maturation protease, ClpP-related | - |
| KZZ50_RS10080 (KZZ50_10050) | - | 2036725..2037912 (-) | 1188 | WP_031902643.1 | phage portal protein | - |
| KZZ50_RS10085 (KZZ50_10055) | - | 2037928..2039589 (-) | 1662 | WP_000625088.1 | terminase large subunit | - |
| KZZ50_RS10090 (KZZ50_10060) | - | 2039586..2039930 (-) | 345 | WP_000402904.1 | hypothetical protein | - |
| KZZ50_RS10095 (KZZ50_10065) | - | 2040060..2040359 (-) | 300 | WP_000988332.1 | HNH endonuclease | - |
| KZZ50_RS10100 (KZZ50_10070) | - | 2040591..2041007 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| KZZ50_RS10105 (KZZ50_10075) | - | 2041035..2041235 (-) | 201 | WP_000265043.1 | DUF1514 family protein | - |
| KZZ50_RS10110 (KZZ50_10080) | - | 2041235..2041384 (-) | 150 | WP_000237868.1 | transcriptional activator RinB | - |
| KZZ50_RS10115 (KZZ50_10085) | - | 2041387..2041587 (-) | 201 | WP_001125015.1 | hypothetical protein | - |
| KZZ50_RS10120 (KZZ50_10090) | - | 2041562..2041750 (-) | 189 | WP_000195823.1 | DUF1381 domain-containing protein | - |
| KZZ50_RS10125 (KZZ50_10095) | - | 2041787..2042320 (-) | 534 | WP_001668923.1 | dUTP diphosphatase | - |
| KZZ50_RS10130 (KZZ50_10100) | - | 2042313..2042561 (-) | 249 | WP_001065085.1 | DUF1024 family protein | - |
| KZZ50_RS10135 (KZZ50_10105) | - | 2042576..2042818 (-) | 243 | WP_031865197.1 | phi PVL orf 51-like protein | - |
| KZZ50_RS10140 (KZZ50_10110) | - | 2042822..2043190 (-) | 369 | WP_000101275.1 | SA1788 family PVL leukocidin-associated protein | - |
| KZZ50_RS10145 (KZZ50_10115) | - | 2043203..2043607 (-) | 405 | WP_000401958.1 | RusA family crossover junction endodeoxyribonuclease | - |
| KZZ50_RS10150 (KZZ50_10120) | - | 2043616..2043834 (-) | 219 | WP_000338530.1 | hypothetical protein | - |
| KZZ50_RS10155 (KZZ50_10125) | - | 2043841..2044734 (-) | 894 | WP_031865196.1 | DnaD domain-containing protein | - |
| KZZ50_RS10160 (KZZ50_10130) | ssbA | 2044764..2045234 (-) | 471 | WP_000934760.1 | single-stranded DNA-binding protein | Machinery gene |
| KZZ50_RS10165 (KZZ50_10135) | - | 2045235..2045852 (-) | 618 | WP_071621397.1 | MBL fold metallo-hydrolase | - |
| KZZ50_RS10170 (KZZ50_10140) | - | 2045933..2046853 (-) | 921 | WP_000138473.1 | recombinase RecT | - |
| KZZ50_RS10175 (KZZ50_10145) | - | 2046855..2048798 (-) | 1944 | WP_031865195.1 | AAA family ATPase | - |
| KZZ50_RS10180 (KZZ50_10150) | - | 2048807..2049070 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| KZZ50_RS10185 (KZZ50_10155) | - | 2049079..2049339 (-) | 261 | WP_000291488.1 | DUF1108 family protein | - |
| KZZ50_RS10190 (KZZ50_10160) | - | 2049432..2049593 (-) | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| KZZ50_RS10195 (KZZ50_10165) | - | 2049590..2049910 (-) | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| KZZ50_RS10200 (KZZ50_10170) | - | 2049969..2050601 (+) | 633 | WP_000275058.1 | hypothetical protein | - |
| KZZ50_RS10205 (KZZ50_10175) | - | 2050616..2050756 (-) | 141 | WP_000939496.1 | hypothetical protein | - |
| KZZ50_RS10210 (KZZ50_10180) | - | 2050787..2050984 (-) | 198 | WP_001148861.1 | hypothetical protein | - |
| KZZ50_RS10215 (KZZ50_10185) | - | 2051000..2051755 (-) | 756 | WP_217654524.1 | phage antirepressor KilAC domain-containing protein | - |
| KZZ50_RS10220 (KZZ50_10190) | - | 2051812..2052351 (+) | 540 | WP_000351243.1 | hypothetical protein | - |
| KZZ50_RS10225 (KZZ50_10195) | - | 2052375..2052635 (-) | 261 | WP_000435341.1 | transcriptional regulator | - |
| KZZ50_RS10230 (KZZ50_10200) | - | 2052648..2052887 (-) | 240 | WP_000548576.1 | helix-turn-helix transcriptional regulator | - |
| KZZ50_RS10235 (KZZ50_10205) | - | 2053058..2053765 (+) | 708 | WP_000094093.1 | XRE family transcriptional regulator | - |
| KZZ50_RS10240 (KZZ50_10210) | - | 2053777..2053923 (+) | 147 | WP_001049401.1 | hypothetical protein | - |
| KZZ50_RS10245 (KZZ50_10215) | - | 2053920..2054105 (+) | 186 | WP_000109192.1 | hypothetical protein | - |
| KZZ50_RS10250 (KZZ50_10220) | - | 2054305..2054487 (+) | 183 | WP_000705240.1 | hypothetical protein | - |
| KZZ50_RS10255 (KZZ50_10225) | - | 2054565..2055278 (+) | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| KZZ50_RS10260 (KZZ50_10230) | - | 2055470..2056507 (+) | 1038 | WP_000857185.1 | site-specific integrase | - |
| KZZ50_RS10265 (KZZ50_10235) | sph | 2056558..2057388 (+) | 831 | Protein_1991 | sphingomyelin phosphodiesterase | - |
| KZZ50_RS10270 (KZZ50_10240) | lukG | 2057626..2058642 (-) | 1017 | WP_000595401.1 | bi-component leukocidin LukGH subunit G | - |
| KZZ50_RS10275 (KZZ50_10245) | lukH | 2058664..2059716 (-) | 1053 | WP_000791415.1 | bi-component leukocidin LukGH subunit H | - |
| KZZ50_RS10280 (KZZ50_10250) | - | 2060152..2061375 (+) | 1224 | WP_000206630.1 | ArgE/DapE family deacylase | - |
| KZZ50_RS10285 (KZZ50_10255) | - | 2061873..2062742 (-) | 870 | WP_001108473.1 | DMT family transporter | - |
| KZZ50_RS10290 (KZZ50_10260) | hemA | 2062745..2063947 (-) | 1203 | WP_000278575.1 | 5-aminolevulinate synthase | - |
| KZZ50_RS10295 (KZZ50_10265) | - | 2064463..2065770 (+) | 1308 | WP_001045345.1 | TrkH family potassium uptake protein | - |
| KZZ50_RS10300 (KZZ50_10270) | groL | 2066309..2067925 (-) | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| KZZ50_RS10305 (KZZ50_10275) | groES | 2068001..2068285 (-) | 285 | WP_000917289.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=591728 KZZ50_RS10160 WP_000934760.1 2044764..2045234(-) (ssbA) [Staphylococcus aureus strain NT_611]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=591728 KZZ50_RS10160 WP_000934760.1 2044764..2045234(-) (ssbA) [Staphylococcus aureus strain NT_611]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTGA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.768 |
100 |
0.372 |
| ssb | Neisseria meningitidis MC58 |
32.948 |
100 |
0.365 |
| ssb | Neisseria gonorrhoeae MS11 |
32.948 |
100 |
0.365 |