Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | M1F51_RS05595 | Genome accession | NZ_CP096526 |
| Coordinates | 1116008..1116307 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain RIVM_M087195 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1111008..1121307
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M1F51_RS05555 (M1F51_05535) | - | 1111069..1111272 (+) | 204 | WP_000087559.1 | YqgQ family protein | - |
| M1F51_RS05560 (M1F51_05540) | - | 1111269..1112255 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| M1F51_RS05565 (M1F51_05545) | - | 1112255..1112584 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| M1F51_RS05570 (M1F51_05550) | - | 1112581..1113204 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| M1F51_RS05575 (M1F51_05555) | comGA | 1113256..1114230 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| M1F51_RS05580 (M1F51_05560) | comGB | 1114202..1115272 (+) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| M1F51_RS05585 (M1F51_05565) | comGC | 1115286..1115597 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| M1F51_RS05590 (M1F51_05570) | comGD | 1115575..1116021 (+) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| M1F51_RS05595 (M1F51_05575) | comGE | 1116008..1116307 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| M1F51_RS05600 (M1F51_05580) | comGF | 1116225..1116722 (+) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| M1F51_RS05605 (M1F51_05585) | - | 1116913..1118085 (+) | 1173 | WP_000195429.1 | IS256-like element IS256 family transposase | - |
| M1F51_RS05610 (M1F51_05590) | - | 1118152..1118298 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| M1F51_RS05615 (M1F51_05595) | - | 1118288..1118812 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| M1F51_RS05620 (M1F51_05600) | gcvT | 1118971..1120062 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=586499 M1F51_RS05595 WP_000844413.1 1116008..1116307(+) (comGE) [Staphylococcus aureus strain RIVM_M087195]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=586499 M1F51_RS05595 WP_000844413.1 1116008..1116307(+) (comGE) [Staphylococcus aureus strain RIVM_M087195]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |