Detailed information NTG0058633

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: TL13_RS04700
• Genome accession: NC_021213
• Coordinates: 944272..945114 (+)
• Length: 280 a.a.
• NCBI ID: WP_015646821.1
• Uniprot ID: -
• Organism: Streptococcus suis TL13
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 939272..950114

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TL13_RS04670 (TL13_0925)	-	940106..940879 (+)	774	WP_015646815.1	ribonuclease HII	-
TL13_RS04675 (TL13_0926)	-	940882..941889 (+)	1008	WP_015646816.1	YdcF family protein	-
TL13_RS04680 (TL13_0927)	trhA	941925..942575 (-)	651	WP_015646817.1	PAQR family membrane homeostasis protein TrhA	-
TL13_RS04685 (TL13_0928)	-	942565..943116 (-)	552	WP_015646818.1	DUF1836 domain-containing protein	-
TL13_RS04690 (TL13_0929)	-	943213..943524 (-)	312	WP_015646819.1	rhodanese-like domain-containing protein	-
TL13_RS04695 (TL13_0930)	-	943654..944211 (+)	558	WP_015646820.1	sugar O-acetyltransferase	-
TL13_RS04700 (TL13_0931)	dprA	944272..945114 (+)	843	WP_015646821.1	DNA-processing protein DprA	Machinery gene
TL13_RS04705 (TL13_0932)	topA	945207..947300 (+)	2094	WP_015646822.1	type I DNA topoisomerase	-
TL13_RS04710 (TL13_0933)	rplJ	947877..948371 (+)	495	WP_002936486.1	50S ribosomal protein L10	-
TL13_RS04715 (TL13_0934)	rplL	948437..948802 (+)	366	WP_002936483.1	50S ribosomal protein L7/L12	-
TL13_RS04720 (TL13_0935)	-	948927..949676 (+)	750	WP_015646823.1	HAD family hydrolase	-

Sequence

Protein

• Length: 280 a.a.
• Molecular weight: 31315.25 Da
• Isoelectric Point: 8.6515

>NTDB_id=58633 TL13_RS04700 WP_015646821.1 944272..945114(+) (dprA) [Streptococcus suis TL13]
MNNFELFKWKKAGLTNLNINKVLAYQEKHGKKLTLRNVAVVSECKNPVLFMENYKNLDTKACREEFNKYPSFSILDDIYP
LALKQIYNPPVLLFYQGDLELLEKSKLAVVGTRNASKNGIQSVQKIIKELNNRFVIVSGLARGIDTAAHIASLKNGGQTI
AVIGTGLDKIYPKENKDLQTYIGKHHLVLTEYEPGAQPLKYHFPERNRIIAGLVEGLVVCEAKMRSGSLITCERALEEGR
EVYAIPGSIMDGKSDGCHHLIQEGAKCITSGLDIISEYQF

Nucleotide

• Length: 843 bp

>NTDB_id=58633 TL13_RS04700 WP_015646821.1 944272..945114(+) (dprA) [Streptococcus suis TL13]
ATGAATAATTTTGAATTGTTTAAATGGAAAAAAGCAGGTTTGACCAATCTTAATATTAATAAAGTTTTGGCCTATCAAGA
AAAACATGGTAAAAAATTGACCTTACGTAATGTCGCTGTAGTGTCTGAATGTAAAAATCCAGTGCTATTTATGGAAAATT
ATAAGAATCTAGATACAAAAGCCTGTCGCGAGGAATTTAATAAGTATCCATCATTTTCAATTTTAGATGACATCTATCCT
TTGGCGCTCAAACAGATTTACAATCCACCTGTACTTTTGTTTTATCAAGGGGATTTAGAATTGCTAGAAAAATCAAAGCT
GGCAGTTGTTGGTACACGAAATGCCAGTAAAAATGGTATCCAATCTGTTCAGAAAATTATCAAAGAACTCAACAATCGTT
TTGTCATTGTCAGTGGTTTGGCAAGAGGAATTGATACGGCTGCCCACATCGCCAGTTTGAAAAATGGAGGCCAAACCATT
GCTGTAATTGGAACAGGTTTGGATAAGATCTATCCCAAAGAAAACAAGGACTTGCAGACCTACATTGGCAAACACCATTT
AGTATTAACAGAGTATGAACCGGGTGCTCAGCCACTCAAATACCATTTCCCAGAACGTAACCGCATCATTGCTGGGTTGG
TAGAAGGTCTGGTGGTCTGTGAGGCAAAAATGCGGTCTGGTAGCTTGATTACCTGCGAACGTGCCTTGGAAGAAGGAAGG
GAAGTCTATGCTATTCCAGGTTCCATTATGGACGGAAAATCAGATGGTTGTCATCATCTGATTCAAGAGGGGGCAAAGTG
CATCACATCGGGCTTGGACATCATTTCTGAGTATCAATTTTAA

Domains

Predicted by InterproScan.

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (1-61)

• DNA recombination-mediator protein A (DNA_processg_A) (73-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Streptococcus mutans UA159	70	100	0.7
dprA/cilB/dalA	Streptococcus mitis SK321	63.929	100	0.639
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	63.929	100	0.639
dprA/cilB/dalA	Streptococcus pneumoniae D39	63.929	100	0.639
dprA/cilB/dalA	Streptococcus pneumoniae R6	63.929	100	0.639
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	63.929	100	0.639
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	63.214	100	0.632
dprA	Lactococcus lactis subsp. cremoris KW2	59.643	100	0.596
dprA	Bacillus subtilis subsp. subtilis str. 168	51.741	71.786	0.371
dprA	Legionella pneumophila strain ERS1305867	41.296	88.214	0.364