Detailed information    

insolico Bioinformatically predicted

Overview

Name   htrA   Type   Regulator
Locus tag   KV238_RS03485 Genome accession   NZ_CP078012
Coordinates   695486..696709 (-) Length   407 a.a.
NCBI ID   WP_126437175.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ_18-036     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 690486..701709
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KV238_RS03460 (KV238_03455) - 690949..691311 (-) 363 WP_195757350.1 helix-turn-helix domain-containing protein -
  KV238_RS03465 (KV238_03460) - 691434..691631 (-) 198 WP_012677176.1 DUF951 domain-containing protein -
  KV238_RS03470 (KV238_03465) dnaN 691709..692845 (-) 1137 WP_043039589.1 DNA polymerase III subunit beta -
  KV238_RS03475 (KV238_03470) dnaA 693002..694354 (-) 1353 WP_230923829.1 chromosomal replication initiator protein DnaA -
  KV238_RS03480 (KV238_03475) spo0J 694588..695361 (-) 774 WP_126437177.1 ParB/RepB/Spo0J family partition protein Regulator
  KV238_RS03485 (KV238_03480) htrA 695486..696709 (-) 1224 WP_126437175.1 S1C family serine protease Regulator
  KV238_RS03490 (KV238_03485) rlmH 696919..697398 (+) 480 WP_012678751.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  KV238_RS03510 (KV238_03505) - 698430..701015 (-) 2586 WP_230923830.1 YfhO family protein -

Sequence

Protein


Download         Length: 407 a.a.        Molecular weight: 42451.04 Da        Isoelectric Point: 5.4809

>NTDB_id=586253 KV238_RS03485 WP_126437175.1 695486..696709(-) (htrA) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
MLKSKNILKPLWVLAIGFLGGLLAALVVNGFSQNSLTSSDAKGATTTSNVSFNNTTDTTKAVKVVQDAVVSVINYQKAAS
PAISNPYINLFGEENDTSAVQKEDELSIHSEGSGVVYKKEGNTAYLVTNNHVIEGAQRIEILTADGSKIVGELVGADTYS
DLAVVKIAADKIKTIAKFADSTKINVGEVAIAIGSPLGTKYANSVTEGIVSSLSRTVTSRNEAGETISTNAIQTDAAINP
GNSGGPLINIEGQVIGINSSKISSTPTGSGGAIEGIGFAIPSSDVVTIINQLESNGAVIRPALGITMVNLSNLSTSALIQ
LNIPTSVTSGVVVASTQNSMPALGKLEQYDVITEVDGKEVSSISDLQSVLYSHEINDTIKVTFYRGTAKKKVDIKLTKTT
KDLTKKQ

Nucleotide


Download         Length: 1224 bp        

>NTDB_id=586253 KV238_RS03485 WP_126437175.1 695486..696709(-) (htrA) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
GTGTTAAAATCAAAAAATATATTGAAGCCCTTATGGGTTTTAGCCATTGGATTTTTAGGGGGCTTATTAGCTGCCTTAGT
TGTTAACGGATTTAGTCAGAATTCTCTAACGTCTTCAGATGCAAAGGGAGCAACGACAACAAGCAACGTCAGCTTTAACA
ATACAACTGATACAACAAAAGCTGTTAAGGTGGTTCAAGATGCTGTAGTGTCTGTTATTAACTATCAAAAGGCTGCTTCG
CCTGCTATTTCAAATCCTTACATCAATCTTTTTGGAGAAGAAAATGACACCTCAGCGGTACAAAAAGAGGACGAGCTAAG
CATACACAGTGAAGGCTCCGGTGTTGTTTACAAAAAAGAAGGAAATACCGCTTATCTTGTAACCAACAATCATGTTATTG
AGGGAGCTCAACGAATTGAAATTTTAACAGCAGATGGCTCTAAGATCGTTGGAGAACTAGTTGGTGCAGACACTTATTCT
GACCTAGCTGTTGTCAAAATTGCTGCTGATAAAATCAAAACAATAGCCAAATTTGCAGATTCAACCAAAATTAATGTTGG
AGAGGTAGCCATTGCAATTGGTAGTCCTCTTGGAACAAAATATGCCAACTCAGTGACAGAAGGGATTGTTTCGAGTCTAA
GCCGTACAGTCACTTCAAGAAATGAGGCAGGTGAGACTATCTCAACAAATGCTATCCAAACTGATGCTGCTATCAATCCA
GGTAATTCAGGTGGACCACTCATCAATATTGAAGGTCAGGTCATTGGTATCAACTCAAGTAAAATATCCTCAACACCTAC
TGGCAGCGGCGGAGCCATTGAAGGGATTGGCTTTGCTATTCCATCAAGCGATGTTGTCACCATTATTAACCAACTAGAAT
CTAACGGAGCTGTTATCAGACCAGCCTTAGGCATTACTATGGTAAATCTAAGCAATCTATCAACCAGTGCATTGATTCAA
TTGAACATTCCAACAAGCGTTACCAGTGGTGTTGTCGTAGCTTCTACTCAAAATAGCATGCCAGCTCTTGGCAAATTGGA
GCAGTATGATGTCATTACTGAGGTTGACGGTAAAGAGGTTAGCTCAATCAGTGACCTACAAAGTGTCCTATACAGTCATG
AGATTAACGACACGATTAAGGTAACCTTCTACAGAGGAACTGCTAAGAAAAAAGTTGACATCAAATTAACAAAAACAACT
AAGGATCTAACTAAAAAGCAGTAA

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(301-396)

Trypsin-like peptidase domain (Trypsin_2)

(112-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.275

100

0.614
  htrA Streptococcus gordonii str. Challis substr. CH1

57.855

98.526

0.57
  htrA Streptococcus mitis NCTC 12261

55.164

97.543

0.538
  htrA Streptococcus pneumoniae Rx1

54.135

98.034

0.531
  htrA Streptococcus pneumoniae D39

54.135

98.034

0.531
  htrA Streptococcus pneumoniae R6

54.135

98.034

0.531
  htrA Streptococcus pneumoniae TIGR4

54.135

98.034

0.531