Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   KV238_RS03480 Genome accession   NZ_CP078012
Coordinates   694588..695361 (-) Length   257 a.a.
NCBI ID   WP_126437177.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ_18-036     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 689588..700361
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KV238_RS03455 (KV238_03450) ychF 689750..690865 (-) 1116 WP_043041266.1 redox-regulated ATPase YchF -
  KV238_RS03460 (KV238_03455) - 690949..691311 (-) 363 WP_195757350.1 helix-turn-helix domain-containing protein -
  KV238_RS03465 (KV238_03460) - 691434..691631 (-) 198 WP_012677176.1 DUF951 domain-containing protein -
  KV238_RS03470 (KV238_03465) dnaN 691709..692845 (-) 1137 WP_043039589.1 DNA polymerase III subunit beta -
  KV238_RS03475 (KV238_03470) dnaA 693002..694354 (-) 1353 WP_230923829.1 chromosomal replication initiator protein DnaA -
  KV238_RS03480 (KV238_03475) spo0J 694588..695361 (-) 774 WP_126437177.1 ParB/RepB/Spo0J family partition protein Regulator
  KV238_RS03485 (KV238_03480) htrA 695486..696709 (-) 1224 WP_126437175.1 S1C family serine protease Regulator
  KV238_RS03490 (KV238_03485) rlmH 696919..697398 (+) 480 WP_012678751.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29087.81 Da        Isoelectric Point: 9.8971

>NTDB_id=586252 KV238_RS03480 WP_126437177.1 694588..695361(-) (spo0J) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
MTEILMHIPIEDIVANPYQPRLQFNQKELEELAHSIQANGLIQPIIVRKSDVFGYELVAGERRFKAAKLAGLQKIPAIVK
EMSTLESMQQAIVENLQRSNLNAIEEAKAYQLLIDKNKMTHEDIAAYMGKSRPYISNTIRLLQLPDVIKQAIEDGTISAG
HARALLSLSTPKEQELYFHNILDQGLSVRQIEQLVKAKHHPKKRSKHKTIFVKSLEKELSKSLGLPVALSLKKNDSGQLQ
LSFSNQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=586252 KV238_RS03480 WP_126437177.1 694588..695361(-) (spo0J) [Streptococcus equi subsp. zooepidemicus strain SEZ_18-036]
ATGACAGAAATCCTAATGCACATTCCTATCGAGGATATTGTGGCAAATCCTTATCAACCACGTCTTCAATTTAATCAAAA
AGAGCTTGAAGAGCTGGCACATTCCATTCAGGCTAATGGTTTGATTCAACCAATCATTGTCAGAAAATCTGATGTATTTG
GCTATGAATTAGTCGCTGGAGAACGACGCTTTAAAGCAGCCAAGCTGGCAGGACTTCAAAAGATTCCAGCAATTGTTAAG
GAAATGTCTACTCTTGAGAGCATGCAGCAGGCCATCGTAGAAAACCTACAGCGCTCAAATTTAAATGCTATTGAAGAGGC
TAAGGCCTATCAATTACTCATTGATAAAAATAAGATGACCCATGAGGACATCGCAGCATACATGGGAAAATCACGCCCTT
ATATCAGCAACACCATCAGGCTGCTGCAACTACCAGACGTTATTAAACAAGCGATTGAGGACGGTACCATTAGTGCTGGA
CATGCAAGAGCCTTATTATCCTTGTCAACACCAAAAGAGCAGGAGCTTTATTTTCACAACATTCTGGATCAAGGCTTAAG
CGTTAGGCAAATCGAACAGCTGGTAAAAGCTAAGCATCACCCCAAAAAAAGAAGCAAACATAAAACCATTTTTGTGAAAT
CTTTAGAAAAAGAGCTCTCAAAATCATTAGGATTACCTGTGGCATTGTCTCTCAAAAAAAATGACAGTGGGCAGCTGCAA
CTGTCATTTTCAAACCAAGAAGAATTGAACAGAATTATCAACAAGCTGCTTTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(7-95)

HTH domain found in ParB protein (HTH_ParB)

(148-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

61.719

99.611

0.615