Detailed information NTG0058611

Bioinformatically predicted

Overview

• Name: comGF/cglF
• Type: Machinery gene
• Locus tag: TL13_RS00805
• Genome accession: NC_021213
• Coordinates: 129330..129764 (+)
• Length: 144 a.a.
• NCBI ID: WP_015646275.1
• Uniprot ID: -
• Organism: Streptococcus suis TL13
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 124330..134764

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TL13_RS00770 (TL13_0153)	-	125072..125437 (+)	366	WP_014637310.1	DUF1033 family protein	-
TL13_RS00775 (TL13_0154)	-	125472..126422 (-)	951	WP_014637311.1	S66 peptidase family protein	-
TL13_RS00780 (TL13_0155)	comYA	126508..127458 (+)	951	WP_015646270.1	competence type IV pilus ATPase ComGA	Machinery gene
TL13_RS00785 (TL13_0156)	comYB	127370..128407 (+)	1038	WP_051089044.1	competence type IV pilus assembly protein ComGB	Machinery gene
TL13_RS00790 (TL13_0157)	comYC	128409..128690 (+)	282	WP_015646272.1	competence type IV pilus major pilin ComGC	Machinery gene
TL13_RS00795 (TL13_0158)	comGD	128671..129078 (+)	408	WP_015646273.1	competence type IV pilus minor pilin ComGD	-
TL13_RS00800 (TL13_0159)	comYE	129050..129343 (+)	294	WP_024401507.1	competence type IV pilus minor pilin ComGE	Machinery gene
TL13_RS00805 (TL13_0160)	comGF/cglF	129330..129764 (+)	435	WP_015646275.1	competence type IV pilus minor pilin ComGF	Machinery gene
TL13_RS00810 (TL13_0161)	comGG	129742..130155 (+)	414	WP_015646276.1	competence type IV pilus minor pilin ComGG	-
TL13_RS00815 (TL13_0162)	-	131334..132008 (-)	675	WP_015646277.1	head maturation protease, ClpP-related	-
TL13_RS00820 (TL13_0163)	-	131998..132489 (-)	492	WP_015646278.1	hypothetical protein	-
TL13_RS00825 (TL13_0164)	-	132502..133017 (-)	516	WP_041179361.1	hypothetical protein	-
TL13_RS10750 (TL13_0165)	-	133165..133332 (-)	168	WP_015646280.1	hypothetical protein	-
TL13_RS00830 (TL13_0166)	-	133376..133834 (-)	459	WP_015646281.1	hypothetical protein	-
TL13_RS00835 (TL13_0167)	-	133838..134299 (-)	462	WP_015646282.1	hypothetical protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16387.70 Da
• Isoelectric Point: 7.1649

>NTDB_id=58611 TL13_RS00805 WP_015646275.1 129330..129764(+) (comGF/cglF) [Streptococcus suis TL13]
MLKSKIPAFTLLECLVALVILSGSLLVFEGLSKLLVQEAHYQGQTVQKEWLVFSSQLRSEWDQTDLVKVENGKVYVDKGG
QALAFGKSRSDDFRKTNDRGQGYQPMLYHLDSAAISQENQLVRIDFSFKNGEERTFIYAFKEKS

Nucleotide

• Length: 435 bp

>NTDB_id=58611 TL13_RS00805 WP_015646275.1 129330..129764(+) (comGF/cglF) [Streptococcus suis TL13]
TTGTTAAAAAGTAAAATTCCTGCTTTTACTCTCTTGGAATGCTTGGTAGCTTTAGTCATTCTTTCAGGTAGTCTTCTGGT
CTTTGAAGGCTTGTCAAAACTGCTGGTCCAAGAAGCGCATTATCAAGGTCAGACCGTTCAAAAGGAATGGTTGGTCTTCT
CTAGTCAATTGCGGTCGGAGTGGGACCAGACTGACTTGGTCAAGGTTGAAAATGGCAAGGTCTATGTTGATAAGGGAGGG
CAGGCTTTGGCCTTTGGTAAGTCACGGTCGGATGATTTTCGGAAAACAAATGACAGGGGACAGGGCTACCAGCCCATGCT
CTATCATCTAGACAGCGCAGCTATTTCCCAAGAAAACCAGCTGGTGCGCATCGACTTTAGCTTTAAAAATGGAGAGGAGC
GGACCTTTATCTATGCTTTTAAAGAAAAAAGTTAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (37-134)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF/cglF	Streptococcus pneumoniae TIGR4	54.61	97.917	0.535
comGF/cglF	Streptococcus pneumoniae Rx1	54.61	97.917	0.535
comGF/cglF	Streptococcus pneumoniae D39	54.61	97.917	0.535
comGF/cglF	Streptococcus pneumoniae R6	54.61	97.917	0.535
comGF/cglF	Streptococcus mitis NCTC 12261	55.224	93.056	0.514
comYF	Streptococcus mutans UA140	50.694	100	0.507
comYF	Streptococcus mutans UA159	50	100	0.5
comGF/cglF	Streptococcus mitis SK321	52.239	93.056	0.486
comGF	Lactococcus lactis subsp. cremoris KW2	46.809	97.917	0.458