Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | KU511_RS07365 | Genome accession | NZ_CP077928 |
| Coordinates | 1443037..1443495 (-) | Length | 152 a.a. |
| NCBI ID | WP_225798362.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain 196 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1438037..1448495
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KU511_RS07310 (KU511_07295) | - | 1438151..1438357 (-) | 207 | WP_054192815.1 | hypothetical protein | - |
| KU511_RS07315 (KU511_07300) | - | 1438370..1438618 (-) | 249 | WP_160194614.1 | phi PVL orf 51-like protein | - |
| KU511_RS07320 (KU511_07305) | - | 1438619..1438990 (-) | 372 | WP_053005624.1 | SA1788 family PVL leukocidin-associated protein | - |
| KU511_RS07325 (KU511_07310) | - | 1438991..1439176 (-) | 186 | WP_001187244.1 | DUF3113 family protein | - |
| KU511_RS07330 (KU511_07315) | - | 1439181..1439585 (-) | 405 | WP_021758092.1 | DUF1064 domain-containing protein | - |
| KU511_RS07335 (KU511_07320) | - | 1439595..1439816 (-) | 222 | WP_001123695.1 | DUF3269 family protein | - |
| KU511_RS07340 (KU511_07325) | - | 1439829..1439987 (-) | 159 | WP_031929742.1 | hypothetical protein | - |
| KU511_RS07345 (KU511_07330) | - | 1439984..1440769 (-) | 786 | WP_024273306.1 | ATP-binding protein | - |
| KU511_RS07350 (KU511_07335) | - | 1440782..1441603 (-) | 822 | WP_225798360.1 | phage replisome organizer N-terminal domain-containing protein | - |
| KU511_RS07355 (KU511_07340) | - | 1441575..1442357 (-) | 783 | WP_000240897.1 | AP2 domain-containing protein | - |
| KU511_RS07360 (KU511_07345) | - | 1442357..1443025 (-) | 669 | WP_225798361.1 | putative HNHc nuclease | - |
| KU511_RS07365 (KU511_07350) | ssbA | 1443037..1443495 (-) | 459 | WP_225798362.1 | single-stranded DNA-binding protein | Machinery gene |
| KU511_RS07370 (KU511_07355) | - | 1443495..1444118 (-) | 624 | WP_000139720.1 | DUF1071 domain-containing protein | - |
| KU511_RS07375 (KU511_07360) | - | 1444111..1444332 (-) | 222 | WP_000815401.1 | DUF2483 family protein | - |
| KU511_RS07380 (KU511_07365) | - | 1444342..1444602 (-) | 261 | WP_225798363.1 | DUF1108 family protein | - |
| KU511_RS07385 (KU511_07370) | - | 1444696..1444857 (-) | 162 | WP_042856228.1 | DUF1270 family protein | - |
| KU511_RS07390 (KU511_07375) | - | 1444871..1445080 (-) | 210 | WP_000455726.1 | hypothetical protein | - |
| KU511_RS07395 (KU511_07380) | - | 1445093..1445817 (-) | 725 | Protein_1421 | BRO family protein | - |
| KU511_RS14125 | - | 1445874..1446008 (+) | 135 | WP_001119050.1 | hypothetical protein | - |
| KU511_RS07400 (KU511_07385) | - | 1446005..1446208 (-) | 204 | WP_000394020.1 | hypothetical protein | - |
| KU511_RS07405 (KU511_07390) | - | 1446223..1446666 (-) | 444 | WP_033842711.1 | hypothetical protein | - |
| KU511_RS07410 (KU511_07395) | - | 1446679..1446927 (-) | 249 | WP_033842713.1 | helix-turn-helix domain-containing protein | - |
| KU511_RS07415 (KU511_07400) | - | 1447104..1447433 (+) | 330 | WP_015978337.1 | helix-turn-helix domain-containing protein | - |
| KU511_RS07420 (KU511_07405) | - | 1447455..1447916 (+) | 462 | WP_033842715.1 | ImmA/IrrE family metallo-endopeptidase | - |
Sequence
Protein
Download Length: 152 a.a. Molecular weight: 17163.73 Da Isoelectric Point: 5.1724
>NTDB_id=585428 KU511_RS07365 WP_225798362.1 1443037..1443495(-) (ssbA) [Staphylococcus aureus strain 196]
MLNRTVLVGRLTKDPEYRTTPNGVSVTTFTIAVNRTFTNAQGEREADFINCVTFRKQAENVNNYLSKGSLAGVDGRLQSR
SYENQVGQRVFVTEVVADNVQFLEPKNNNQQQNNNYQQQNNSYNAPQNRQQSNNPFANANGPIEITDDDLPF
MLNRTVLVGRLTKDPEYRTTPNGVSVTTFTIAVNRTFTNAQGEREADFINCVTFRKQAENVNNYLSKGSLAGVDGRLQSR
SYENQVGQRVFVTEVVADNVQFLEPKNNNQQQNNNYQQQNNSYNAPQNRQQSNNPFANANGPIEITDDDLPF
Nucleotide
Download Length: 459 bp
>NTDB_id=585428 KU511_RS07365 WP_225798362.1 1443037..1443495(-) (ssbA) [Staphylococcus aureus strain 196]
ATGTTAAACAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATCGAACAACGCCAAATGGTGTGAGTGTTAC
CACTTTCACTATCGCAGTTAACAGAACATTTACTAACGCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTT
TTAGAAAACAAGCAGAAAATGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACGC
AGTTATGAAAACCAAGTCGGGCAACGTGTATTTGTTACAGAAGTAGTAGCGGACAATGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACAAAACAACAATTATCAACAACAGAACAATTCATATAACGCACCTCAGAATAGACAACAATCAAATA
ACCCGTTTGCTAATGCTAATGGTCCTATAGAAATCACTGACGATGATTTACCATTCTAG
ATGTTAAACAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATCGAACAACGCCAAATGGTGTGAGTGTTAC
CACTTTCACTATCGCAGTTAACAGAACATTTACTAACGCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTT
TTAGAAAACAAGCAGAAAATGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACGC
AGTTATGAAAACCAAGTCGGGCAACGTGTATTTGTTACAGAAGTAGTAGCGGACAATGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACAAAACAACAATTATCAACAACAGAACAATTCATATAACGCACCTCAGAATAGACAACAATCAAATA
ACCCGTTTGCTAATGCTAATGGTCCTATAGAAATCACTGACGATGATTTACCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
62.209 |
100 |
0.704 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.118 |
100 |
0.605 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
69.737 |
0.408 |
| ssb | Glaesserella parasuis strain SC1401 |
32.768 |
100 |
0.382 |
| ssb | Neisseria meningitidis MC58 |
32.759 |
100 |
0.375 |
| ssb | Neisseria gonorrhoeae MS11 |
32.759 |
100 |
0.375 |