Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | I6L39_RS10440 | Genome accession | NZ_CP077395 |
| Coordinates | 2178948..2179268 (-) | Length | 106 a.a. |
| NCBI ID | WP_216991722.1 | Uniprot ID | - |
| Organism | Aeromonas sp. FDAARGOS 1409 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2173948..2184268
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L39_RS10420 (I6L39_10420) | - | 2174364..2175032 (-) | 669 | WP_216991720.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| I6L39_RS10425 (I6L39_10425) | - | 2175290..2176261 (+) | 972 | WP_216991721.1 | response regulator | - |
| I6L39_RS10430 (I6L39_10430) | - | 2176334..2177728 (-) | 1395 | WP_209795105.1 | peptide MFS transporter | - |
| I6L39_RS10435 (I6L39_10435) | galU | 2177942..2178853 (-) | 912 | WP_209795104.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| I6L39_RS10440 (I6L39_10440) | comEA | 2178948..2179268 (-) | 321 | WP_216991722.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| I6L39_RS10445 (I6L39_10445) | cysQ | 2179436..2180206 (+) | 771 | WP_216991723.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| I6L39_RS10450 (I6L39_10450) | - | 2180275..2180571 (-) | 297 | WP_216991724.1 | YciI family protein | - |
| I6L39_RS10455 (I6L39_10455) | - | 2180596..2181147 (-) | 552 | WP_209795101.1 | septation protein A | - |
| I6L39_RS10460 (I6L39_10460) | - | 2181238..2182743 (-) | 1506 | WP_216991725.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| I6L39_RS10465 (I6L39_10465) | - | 2182938..2183570 (+) | 633 | WP_209795099.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11000.90 Da Isoelectric Point: 9.1128
>NTDB_id=581152 I6L39_RS10440 WP_216991722.1 2178948..2179268(-) (comEA) [Aeromonas sp. FDAARGOS 1409]
MIKKPLIAALLLGCLPLLTQPVLAADKPATKPAATVATTTEAGKINLNTASADELASLKGIGEKKAQAIVDHREKQGKFT
SVDQLADVSGIGPATLEANRDMIIVK
MIKKPLIAALLLGCLPLLTQPVLAADKPATKPAATVATTTEAGKINLNTASADELASLKGIGEKKAQAIVDHREKQGKFT
SVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=581152 I6L39_RS10440 WP_216991722.1 2178948..2179268(-) (comEA) [Aeromonas sp. FDAARGOS 1409]
ATGATCAAAAAGCCCCTGATCGCCGCCCTGTTGCTGGGCTGCCTCCCTCTGCTGACTCAGCCCGTACTGGCCGCCGACAA
GCCGGCCACCAAGCCTGCCGCGACCGTCGCGACCACCACTGAGGCCGGCAAGATCAACCTCAATACCGCCAGCGCCGATG
AACTCGCGTCCCTGAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGACCATCGCGAGAAACAGGGCAAGTTCACC
TCGGTGGATCAGCTGGCGGACGTGAGCGGCATCGGGCCCGCCACCCTGGAGGCGAATCGGGACATGATTATCGTCAAGTA
A
ATGATCAAAAAGCCCCTGATCGCCGCCCTGTTGCTGGGCTGCCTCCCTCTGCTGACTCAGCCCGTACTGGCCGCCGACAA
GCCGGCCACCAAGCCTGCCGCGACCGTCGCGACCACCACTGAGGCCGGCAAGATCAACCTCAATACCGCCAGCGCCGATG
AACTCGCGTCCCTGAAGGGCATCGGCGAGAAGAAGGCACAGGCCATCGTCGACCATCGCGAGAAACAGGGCAAGTTCACC
TCGGTGGATCAGCTGGCGGACGTGAGCGGCATCGGGCCCGCCACCCTGGAGGCGAATCGGGACATGATTATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.509 |
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.509 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.664 |
100 |
0.481 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
45.361 |
91.509 |
0.415 |
| comEA | Legionella pneumophila strain ERS1305867 |
42.157 |
96.226 |
0.406 |
| comEA | Legionella pneumophila str. Paris |
42.157 |
96.226 |
0.406 |