Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | I6L45_RS10335 | Genome accession | NZ_CP077363 |
| Coordinates | 2155028..2155348 (-) | Length | 106 a.a. |
| NCBI ID | WP_216984143.1 | Uniprot ID | - |
| Organism | Aeromonas sp. FDAARGOS 1415 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2150028..2160348
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L45_RS10315 (I6L45_10315) | - | 2150418..2151092 (-) | 675 | WP_216984197.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| I6L45_RS10320 (I6L45_10320) | - | 2151371..2152342 (+) | 972 | WP_216984142.1 | response regulator | - |
| I6L45_RS10325 (I6L45_10325) | - | 2152414..2153808 (-) | 1395 | WP_134697108.1 | peptide MFS transporter | - |
| I6L45_RS10330 (I6L45_10330) | galU | 2154022..2154933 (-) | 912 | WP_210549766.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| I6L45_RS10335 (I6L45_10335) | comEA | 2155028..2155348 (-) | 321 | WP_216984143.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| I6L45_RS10340 (I6L45_10340) | cysQ | 2155515..2156285 (+) | 771 | WP_216984144.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| I6L45_RS10345 (I6L45_10345) | - | 2156369..2156665 (-) | 297 | WP_043764228.1 | YciI family protein | - |
| I6L45_RS10350 (I6L45_10350) | - | 2156690..2157241 (-) | 552 | WP_210549763.1 | septation protein A | - |
| I6L45_RS10355 (I6L45_10355) | - | 2157319..2158854 (-) | 1536 | WP_216984145.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| I6L45_RS10360 (I6L45_10360) | - | 2159049..2159681 (+) | 633 | WP_216984146.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 10933.72 Da Isoelectric Point: 8.0167
>NTDB_id=580899 I6L45_RS10335 WP_216984143.1 2155028..2155348(-) (comEA) [Aeromonas sp. FDAARGOS 1415]
MTPKALVAALLLGCLPLLSQPVLAADKPATKPAATVATTTETGKINLNTASADELASLKGIGEKKAQAIVDHREKQGKFT
SVDQLADVSGIGPATLEANRDMIIVK
MTPKALVAALLLGCLPLLSQPVLAADKPATKPAATVATTTETGKINLNTASADELASLKGIGEKKAQAIVDHREKQGKFT
SVDQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=580899 I6L45_RS10335 WP_216984143.1 2155028..2155348(-) (comEA) [Aeromonas sp. FDAARGOS 1415]
ATGACCCCCAAAGCTCTCGTTGCAGCCCTGTTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCCGTGCTGGCCGCCGACAA
ACCGGCCACCAAGCCCGCCGCGACCGTCGCGACCACCACGGAGACCGGCAAGATCAACCTCAATACCGCCAGCGCCGATG
AGCTCGCCTCCCTGAAGGGCATAGGCGAGAAGAAGGCACAGGCCATCGTCGACCATCGCGAAAAACAGGGCAAGTTTACC
TCTGTGGACCAGCTAGCAGACGTGAGTGGCATCGGGCCCGCCACCCTGGAAGCAAACCGGGACATGATTATCGTCAAGTA
A
ATGACCCCCAAAGCTCTCGTTGCAGCCCTGTTGCTGGGCTGCCTCCCCCTGTTGAGCCAACCCGTGCTGGCCGCCGACAA
ACCGGCCACCAAGCCCGCCGCGACCGTCGCGACCACCACGGAGACCGGCAAGATCAACCTCAATACCGCCAGCGCCGATG
AGCTCGCCTCCCTGAAGGGCATAGGCGAGAAGAAGGCACAGGCCATCGTCGACCATCGCGAAAAACAGGGCAAGTTTACC
TCTGTGGACCAGCTAGCAGACGTGAGTGGCATCGGGCCCGCCACCCTGGAAGCAAACCGGGACATGATTATCGTCAAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.519 |
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.519 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
47.664 |
100 |
0.481 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
44.144 |
100 |
0.462 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
45.361 |
91.509 |
0.415 |
| comEA | Legionella pneumophila strain ERS1305867 |
42.574 |
95.283 |
0.406 |
| comEA | Legionella pneumophila str. Paris |
42.574 |
95.283 |
0.406 |